Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.08■■□□□ 1.76
CCHCR1Q8TD31 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CCHCR1Q8TD31 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.07■■□□□ 1.76
CCHCR1Q8TD31 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
CCHCR1Q8TD31 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCHCR1Q8TD31 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCHCR1Q8TD31 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCHCR1Q8TD31 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.06■■□□□ 1.76
CCHCR1Q8TD31 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.05■■□□□ 1.76
CCHCR1Q8TD31 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCHCR1Q8TD31 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCHCR1Q8TD31 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CCHCR1Q8TD31 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCHCR1Q8TD31 AC018358.1-201ENST00000631079 1402 ntBASIC26.03■■□□□ 1.76
CCHCR1Q8TD31 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCHCR1Q8TD31 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCHCR1Q8TD31 AC135983.2-203ENST00000454486 1613 ntBASIC26.02■■□□□ 1.76
CCHCR1Q8TD31 AC021231.2-201ENST00000594613 730 ntBASIC26.01■■□□□ 1.75
CCHCR1Q8TD31 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
CCHCR1Q8TD31 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCHCR1Q8TD31 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCHCR1Q8TD31 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CCHCR1Q8TD31 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CCHCR1Q8TD31 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26■■□□□ 1.75
CCHCR1Q8TD31 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.99■■□□□ 1.75
CCHCR1Q8TD31 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.99■■□□□ 1.75
CCHCR1Q8TD31 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.99■■□□□ 1.75
CCHCR1Q8TD31 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCHCR1Q8TD31 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCHCR1Q8TD31 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCHCR1Q8TD31 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCHCR1Q8TD31 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.98■■□□□ 1.75
CCHCR1Q8TD31 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCHCR1Q8TD31 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CCHCR1Q8TD31 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCHCR1Q8TD31 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CCHCR1Q8TD31 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.97■■□□□ 1.75
CCHCR1Q8TD31 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCHCR1Q8TD31 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCHCR1Q8TD31 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.97■■□□□ 1.75
CCHCR1Q8TD31 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCHCR1Q8TD31 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCHCR1Q8TD31 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.96■■□□□ 1.75
CCHCR1Q8TD31 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCHCR1Q8TD31 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CCHCR1Q8TD31 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CCHCR1Q8TD31 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.95■■□□□ 1.74
CCHCR1Q8TD31 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCHCR1Q8TD31 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCHCR1Q8TD31 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCHCR1Q8TD31 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CCHCR1Q8TD31 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CCHCR1Q8TD31 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCHCR1Q8TD31 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCHCR1Q8TD31 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCHCR1Q8TD31 ABHD17AP4-201ENST00000411545 909 ntBASIC25.92■■□□□ 1.74
CCHCR1Q8TD31 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CCHCR1Q8TD31 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCHCR1Q8TD31 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCHCR1Q8TD31 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCHCR1Q8TD31 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.91■■□□□ 1.74
CCHCR1Q8TD31 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CCHCR1Q8TD31 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CCHCR1Q8TD31 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCHCR1Q8TD31 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCHCR1Q8TD31 WHAMMP2-203ENST00000563942 1603 ntBASIC25.91■■□□□ 1.74
CCHCR1Q8TD31 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCHCR1Q8TD31 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCHCR1Q8TD31 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCHCR1Q8TD31 LINC00273-201ENST00000539813 1452 ntBASIC25.9■■□□□ 1.74
CCHCR1Q8TD31 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CCHCR1Q8TD31 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
CCHCR1Q8TD31 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
CCHCR1Q8TD31 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCHCR1Q8TD31 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCHCR1Q8TD31 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
CCHCR1Q8TD31 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.89■■□□□ 1.74
CCHCR1Q8TD31 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.89■■□□□ 1.74
CCHCR1Q8TD31 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CCHCR1Q8TD31 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
CCHCR1Q8TD31 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCHCR1Q8TD31 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.88■■□□□ 1.73
CCHCR1Q8TD31 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCHCR1Q8TD31 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCHCR1Q8TD31 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCHCR1Q8TD31 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.87■■□□□ 1.73
CCHCR1Q8TD31 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCHCR1Q8TD31 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.86■■□□□ 1.73
CCHCR1Q8TD31 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CCHCR1Q8TD31 ZNRF2P2-203ENST00000454624 420 ntBASIC25.86■■□□□ 1.73
CCHCR1Q8TD31 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CCHCR1Q8TD31 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CCHCR1Q8TD31 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms