Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC012354.3-201ENST00000623734 483 ntBASIC31.39■■■□□ 2.62
RTL9Q8NET4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RTL9Q8NET4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.38■■■□□ 2.61
RTL9Q8NET4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RTL9Q8NET4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
RTL9Q8NET4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.37■■■□□ 2.61
RTL9Q8NET4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.36■■■□□ 2.61
RTL9Q8NET4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.36■■■□□ 2.61
RTL9Q8NET4 AL157400.5-201ENST00000507624 621 ntBASIC31.36■■■□□ 2.61
RTL9Q8NET4 AC126177.7-201ENST00000547904 679 ntBASIC31.36■■■□□ 2.61
RTL9Q8NET4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RTL9Q8NET4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.35■■■□□ 2.61
RTL9Q8NET4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RTL9Q8NET4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RTL9Q8NET4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.34■■■□□ 2.61
RTL9Q8NET4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL9Q8NET4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL9Q8NET4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL9Q8NET4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RTL9Q8NET4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
RTL9Q8NET4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.34■■■□□ 2.61
RTL9Q8NET4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RTL9Q8NET4 ECEL1P2-201ENST00000461596 1295 ntBASIC31.33■■■□□ 2.61
RTL9Q8NET4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.33■■■□□ 2.61
RTL9Q8NET4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
RTL9Q8NET4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
RTL9Q8NET4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.31■■■□□ 2.6
RTL9Q8NET4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RTL9Q8NET4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RTL9Q8NET4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.3■■■□□ 2.6
RTL9Q8NET4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.3■■■□□ 2.6
RTL9Q8NET4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.3■■■□□ 2.6
RTL9Q8NET4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
RTL9Q8NET4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.3■■■□□ 2.6
RTL9Q8NET4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RTL9Q8NET4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.29■■■□□ 2.6
RTL9Q8NET4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
RTL9Q8NET4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RTL9Q8NET4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.29■■■□□ 2.6
RTL9Q8NET4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RTL9Q8NET4 ABCB10P3-201ENST00000561950 2166 ntBASIC31.28■■■□□ 2.6
RTL9Q8NET4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.28■■■□□ 2.6
RTL9Q8NET4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RTL9Q8NET4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RTL9Q8NET4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RTL9Q8NET4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
RTL9Q8NET4 U85056.1-201ENST00000616429 682 ntBASIC31.27■■■□□ 2.6
RTL9Q8NET4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
RTL9Q8NET4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RTL9Q8NET4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
RTL9Q8NET4 AP002414.2-202ENST00000590929 1450 ntBASIC31.25■■■□□ 2.59
RTL9Q8NET4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RTL9Q8NET4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.25■■■□□ 2.59
RTL9Q8NET4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RTL9Q8NET4 AC018358.1-201ENST00000631079 1402 ntBASIC31.24■■■□□ 2.59
RTL9Q8NET4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RTL9Q8NET4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.24■■■□□ 2.59
RTL9Q8NET4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.24■■■□□ 2.59
RTL9Q8NET4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
RTL9Q8NET4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.22■■■□□ 2.59
RTL9Q8NET4 AL033527.3-201ENST00000566366 1196 ntBASIC31.22■■■□□ 2.59
RTL9Q8NET4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RTL9Q8NET4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
RTL9Q8NET4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
RTL9Q8NET4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RTL9Q8NET4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RTL9Q8NET4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RTL9Q8NET4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
RTL9Q8NET4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.2■■■□□ 2.59
RTL9Q8NET4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RTL9Q8NET4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
RTL9Q8NET4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RTL9Q8NET4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RTL9Q8NET4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.19■■■□□ 2.58
RTL9Q8NET4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RTL9Q8NET4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RTL9Q8NET4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RTL9Q8NET4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RTL9Q8NET4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.18■■■□□ 2.58
RTL9Q8NET4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.18■■■□□ 2.58
RTL9Q8NET4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RTL9Q8NET4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
RTL9Q8NET4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RTL9Q8NET4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.17■■■□□ 2.58
RTL9Q8NET4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
RTL9Q8NET4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.16■■■□□ 2.58
RTL9Q8NET4 ABCB10P1-201ENST00000614297 2181 ntBASIC31.15■■■□□ 2.58
RTL9Q8NET4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RTL9Q8NET4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
RTL9Q8NET4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.15■■■□□ 2.58
RTL9Q8NET4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RTL9Q8NET4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RTL9Q8NET4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
RTL9Q8NET4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.13■■■□□ 2.57
RTL9Q8NET4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RTL9Q8NET4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RTL9Q8NET4 AC007029.1-201ENST00000604183 313 ntBASIC31.12■■■□□ 2.57
RTL9Q8NET4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
RTL9Q8NET4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.12■■■□□ 2.57
RTL9Q8NET4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms