Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH20Q8N6Y1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
PCDH20Q8N6Y1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PCDH20Q8N6Y1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH20Q8N6Y1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDH20Q8N6Y1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH20Q8N6Y1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PCDH20Q8N6Y1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH20Q8N6Y1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH20Q8N6Y1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
PCDH20Q8N6Y1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PCDH20Q8N6Y1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH20Q8N6Y1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDH20Q8N6Y1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH20Q8N6Y1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH20Q8N6Y1 AP002414.2-202ENST00000590929 1450 ntBASIC25.65■■□□□ 1.7
PCDH20Q8N6Y1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH20Q8N6Y1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.64■■□□□ 1.69
PCDH20Q8N6Y1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH20Q8N6Y1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH20Q8N6Y1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH20Q8N6Y1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PCDH20Q8N6Y1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDH20Q8N6Y1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
PCDH20Q8N6Y1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PCDH20Q8N6Y1 MIR219A2-201ENST00000608502 1504 ntBASIC25.62■■□□□ 1.69
PCDH20Q8N6Y1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH20Q8N6Y1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
PCDH20Q8N6Y1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH20Q8N6Y1 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.6■■□□□ 1.69
PCDH20Q8N6Y1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDH20Q8N6Y1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH20Q8N6Y1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
PCDH20Q8N6Y1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PCDH20Q8N6Y1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDH20Q8N6Y1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH20Q8N6Y1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDH20Q8N6Y1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
PCDH20Q8N6Y1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH20Q8N6Y1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
PCDH20Q8N6Y1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH20Q8N6Y1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH20Q8N6Y1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.56■■□□□ 1.68
PCDH20Q8N6Y1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH20Q8N6Y1 HSD17B1P1-201ENST00000590052 955 ntBASIC25.56■■□□□ 1.68
PCDH20Q8N6Y1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH20Q8N6Y1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH20Q8N6Y1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH20Q8N6Y1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH20Q8N6Y1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH20Q8N6Y1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH20Q8N6Y1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH20Q8N6Y1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH20Q8N6Y1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH20Q8N6Y1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDH20Q8N6Y1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH20Q8N6Y1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH20Q8N6Y1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH20Q8N6Y1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH20Q8N6Y1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH20Q8N6Y1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH20Q8N6Y1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH20Q8N6Y1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH20Q8N6Y1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDH20Q8N6Y1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH20Q8N6Y1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PCDH20Q8N6Y1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH20Q8N6Y1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH20Q8N6Y1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH20Q8N6Y1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDH20Q8N6Y1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDH20Q8N6Y1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH20Q8N6Y1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH20Q8N6Y1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH20Q8N6Y1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PCDH20Q8N6Y1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDH20Q8N6Y1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH20Q8N6Y1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH20Q8N6Y1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDH20Q8N6Y1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH20Q8N6Y1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH20Q8N6Y1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms