Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC9BQ8N6N2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.69■■□□□ 1.86
TTC9BQ8N6N2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC9BQ8N6N2 ABHD17AP5-201ENST00000580133 923 ntBASIC26.69■■□□□ 1.86
TTC9BQ8N6N2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
TTC9BQ8N6N2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.67■■□□□ 1.86
TTC9BQ8N6N2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TTC9BQ8N6N2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC9BQ8N6N2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
TTC9BQ8N6N2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.67■■□□□ 1.86
TTC9BQ8N6N2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC9BQ8N6N2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC9BQ8N6N2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC9BQ8N6N2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC9BQ8N6N2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC9BQ8N6N2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC9BQ8N6N2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
TTC9BQ8N6N2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.64■■□□□ 1.86
TTC9BQ8N6N2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
TTC9BQ8N6N2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TTC9BQ8N6N2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TTC9BQ8N6N2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
TTC9BQ8N6N2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.85
TTC9BQ8N6N2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
TTC9BQ8N6N2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC9BQ8N6N2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.63■■□□□ 1.85
TTC9BQ8N6N2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC9BQ8N6N2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.62■■□□□ 1.85
TTC9BQ8N6N2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TTC9BQ8N6N2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TTC9BQ8N6N2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC9BQ8N6N2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC9BQ8N6N2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TTC9BQ8N6N2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC9BQ8N6N2 AC139426.1-201ENST00000568218 2529 ntBASIC26.61■■□□□ 1.85
TTC9BQ8N6N2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TTC9BQ8N6N2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC9BQ8N6N2 AC092296.2-201ENST00000589470 999 ntBASIC26.6■■□□□ 1.85
TTC9BQ8N6N2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TTC9BQ8N6N2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TTC9BQ8N6N2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.59■■□□□ 1.85
TTC9BQ8N6N2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.59■■□□□ 1.85
TTC9BQ8N6N2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TTC9BQ8N6N2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.58■■□□□ 1.85
TTC9BQ8N6N2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.57■■□□□ 1.84
TTC9BQ8N6N2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC9BQ8N6N2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.57■■□□□ 1.84
TTC9BQ8N6N2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
TTC9BQ8N6N2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
TTC9BQ8N6N2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
TTC9BQ8N6N2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
TTC9BQ8N6N2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC9BQ8N6N2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC9BQ8N6N2 AP002414.2-202ENST00000590929 1450 ntBASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TTC9BQ8N6N2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC9BQ8N6N2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
TTC9BQ8N6N2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC9BQ8N6N2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.54■■□□□ 1.84
TTC9BQ8N6N2 AL157400.5-201ENST00000507624 621 ntBASIC26.54■■□□□ 1.84
TTC9BQ8N6N2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC9BQ8N6N2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TTC9BQ8N6N2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC9BQ8N6N2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
TTC9BQ8N6N2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.53■■□□□ 1.84
TTC9BQ8N6N2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC9BQ8N6N2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC9BQ8N6N2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
TTC9BQ8N6N2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC9BQ8N6N2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TTC9BQ8N6N2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC9BQ8N6N2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.51■■□□□ 1.83
TTC9BQ8N6N2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.51■■□□□ 1.83
TTC9BQ8N6N2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC9BQ8N6N2 NTF6A-201ENST00000591175 560 ntBASIC26.5■■□□□ 1.83
TTC9BQ8N6N2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TTC9BQ8N6N2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TTC9BQ8N6N2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TTC9BQ8N6N2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.49■■□□□ 1.83
TTC9BQ8N6N2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.49■■□□□ 1.83
TTC9BQ8N6N2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TTC9BQ8N6N2 AC126177.7-201ENST00000547904 679 ntBASIC26.48■■□□□ 1.83
TTC9BQ8N6N2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC9BQ8N6N2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TTC9BQ8N6N2 U85056.1-201ENST00000616429 682 ntBASIC26.47■■□□□ 1.83
TTC9BQ8N6N2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms