Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
DCLRE1AQ6PJP8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.13■■□□□ 1.93
DCLRE1AQ6PJP8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
DCLRE1AQ6PJP8 ABHD17AP5-201ENST00000580133 923 ntBASIC27.13■■□□□ 1.93
DCLRE1AQ6PJP8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
DCLRE1AQ6PJP8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
DCLRE1AQ6PJP8 ABCB10P3-201ENST00000561950 2166 ntBASIC27.12■■□□□ 1.93
DCLRE1AQ6PJP8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
DCLRE1AQ6PJP8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
DCLRE1AQ6PJP8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
DCLRE1AQ6PJP8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DCLRE1AQ6PJP8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
DCLRE1AQ6PJP8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
DCLRE1AQ6PJP8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DCLRE1AQ6PJP8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DCLRE1AQ6PJP8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DCLRE1AQ6PJP8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
DCLRE1AQ6PJP8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.08■■□□□ 1.93
DCLRE1AQ6PJP8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.08■■□□□ 1.93
DCLRE1AQ6PJP8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DCLRE1AQ6PJP8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DCLRE1AQ6PJP8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DCLRE1AQ6PJP8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DCLRE1AQ6PJP8 AC126177.7-201ENST00000547904 679 ntBASIC27.06■■□□□ 1.92
DCLRE1AQ6PJP8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.06■■□□□ 1.92
DCLRE1AQ6PJP8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.06■■□□□ 1.92
DCLRE1AQ6PJP8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
DCLRE1AQ6PJP8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
DCLRE1AQ6PJP8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DCLRE1AQ6PJP8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.05■■□□□ 1.92
DCLRE1AQ6PJP8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.04■■□□□ 1.92
DCLRE1AQ6PJP8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.04■■□□□ 1.92
DCLRE1AQ6PJP8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.04■■□□□ 1.92
DCLRE1AQ6PJP8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DCLRE1AQ6PJP8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
DCLRE1AQ6PJP8 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.03■■□□□ 1.92
DCLRE1AQ6PJP8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
DCLRE1AQ6PJP8 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.03■■□□□ 1.92
DCLRE1AQ6PJP8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.02■■□□□ 1.92
DCLRE1AQ6PJP8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
DCLRE1AQ6PJP8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
DCLRE1AQ6PJP8 AP002414.2-202ENST00000590929 1450 ntBASIC27.01■■□□□ 1.91
DCLRE1AQ6PJP8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.01■■□□□ 1.91
DCLRE1AQ6PJP8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DCLRE1AQ6PJP8 AC092296.2-201ENST00000589470 999 ntBASIC27.01■■□□□ 1.91
DCLRE1AQ6PJP8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
DCLRE1AQ6PJP8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DCLRE1AQ6PJP8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DCLRE1AQ6PJP8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DCLRE1AQ6PJP8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DCLRE1AQ6PJP8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
DCLRE1AQ6PJP8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DCLRE1AQ6PJP8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.98■■□□□ 1.91
DCLRE1AQ6PJP8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
DCLRE1AQ6PJP8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.97■■□□□ 1.91
DCLRE1AQ6PJP8 ECEL1P2-201ENST00000461596 1295 ntBASIC26.97■■□□□ 1.91
DCLRE1AQ6PJP8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
DCLRE1AQ6PJP8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
DCLRE1AQ6PJP8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DCLRE1AQ6PJP8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
DCLRE1AQ6PJP8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DCLRE1AQ6PJP8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
DCLRE1AQ6PJP8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
DCLRE1AQ6PJP8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
DCLRE1AQ6PJP8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
DCLRE1AQ6PJP8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.95■■□□□ 1.9
DCLRE1AQ6PJP8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
DCLRE1AQ6PJP8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
DCLRE1AQ6PJP8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DCLRE1AQ6PJP8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.94■■□□□ 1.9
DCLRE1AQ6PJP8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
DCLRE1AQ6PJP8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DCLRE1AQ6PJP8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
DCLRE1AQ6PJP8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.93■■□□□ 1.9
DCLRE1AQ6PJP8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DCLRE1AQ6PJP8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DCLRE1AQ6PJP8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.92■■□□□ 1.9
DCLRE1AQ6PJP8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DCLRE1AQ6PJP8 NTF6A-201ENST00000591175 560 ntBASIC26.92■■□□□ 1.9
DCLRE1AQ6PJP8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DCLRE1AQ6PJP8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
DCLRE1AQ6PJP8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
DCLRE1AQ6PJP8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
DCLRE1AQ6PJP8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
DCLRE1AQ6PJP8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.89■■□□□ 1.9
DCLRE1AQ6PJP8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
DCLRE1AQ6PJP8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
DCLRE1AQ6PJP8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
DCLRE1AQ6PJP8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
DCLRE1AQ6PJP8 AL359258.2-201ENST00000564063 1566 ntBASIC26.88■■□□□ 1.89
DCLRE1AQ6PJP8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DCLRE1AQ6PJP8 AL157400.5-201ENST00000507624 621 ntBASIC26.88■■□□□ 1.89
DCLRE1AQ6PJP8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
DCLRE1AQ6PJP8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DCLRE1AQ6PJP8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.88■■□□□ 1.89
DCLRE1AQ6PJP8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DCLRE1AQ6PJP8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
DCLRE1AQ6PJP8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DCLRE1AQ6PJP8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DCLRE1AQ6PJP8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms