Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 PIH1YHR034C 1035 nt7.84□□□□□ -1.15
RPA49Q01080 SNA3YJL151C 402 nt7.84□□□□□ -1.15
RPA49Q01080 PRY2YKR013W 990 nt7.84□□□□□ -1.15
RPA49Q01080 CAR2YLR438W 1275 nt7.84□□□□□ -1.15
RPA49Q01080 RUP1YOR138C 2016 nt7.83□□□□□ -1.16
RPA49Q01080 CKI1YLR133W 1749 nt7.82□□□□□ -1.16
RPA49Q01080 SLM3YDL033C 1254 nt7.81□□□□□ -1.16
RPA49Q01080 PIL1YGR086C 1020 nt7.81□□□□□ -1.16
RPA49Q01080 RPR1RPR1 369 nt7.81□□□□□ -1.16
RPA49Q01080 BDS1YOL164W 1941 nt7.81□□□□□ -1.16
RPA49Q01080 YBL111CYBL111C 2004 nt7.8□□□□□ -1.16
RPA49Q01080 PUP2YGR253C 783 nt7.8□□□□□ -1.16
RPA49Q01080 SNF7YLR025W 723 nt7.8□□□□□ -1.16
RPA49Q01080 FRA1YLL029W 2250 nt7.8□□□□□ -1.16
RPA49Q01080 HOG1YLR113W 1308 nt7.79□□□□□ -1.16
RPA49Q01080 PAB1YER165W 1734 nt7.79□□□□□ -1.16
RPA49Q01080 ADH6YMR318C 1083 nt7.79□□□□□ -1.16
RPA49Q01080 UFD1YGR048W 1086 nt7.78□□□□□ -1.16
RPA49Q01080 YAL019W-AYAL019W-A 570 nt7.78□□□□□ -1.16
RPA49Q01080 YPL247CYPL247C 1572 nt7.76□□□□□ -1.17
RPA49Q01080 YAH1YPL252C 519 nt7.76□□□□□ -1.17
RPA49Q01080 YBL113CYBL113C 2379 nt7.75□□□□□ -1.17
RPA49Q01080 PAM17YKR065C 594 nt7.75□□□□□ -1.17
RPA49Q01080 YML122CYML122C 381 nt7.75□□□□□ -1.17
RPA49Q01080 PTH2YBL057C 627 nt7.75□□□□□ -1.17
RPA49Q01080 RTC2YBR147W 891 nt7.75□□□□□ -1.17
RPA49Q01080 UME1YPL139C 1383 nt7.74□□□□□ -1.17
RPA49Q01080 CCW12YLR110C 402 nt7.74□□□□□ -1.17
RPA49Q01080 TRR2YHR106W 1029 nt7.73□□□□□ -1.17
RPA49Q01080 ERG24YNL280C 1317 nt7.73□□□□□ -1.17
RPA49Q01080 HNM1YGL077C 1692 nt7.73□□□□□ -1.17
RPA49Q01080 LAT1YNL071W 1449 nt7.72□□□□□ -1.17
RPA49Q01080 YJL213WYJL213W 996 nt7.72□□□□□ -1.17
RPA49Q01080 YPQ1YOL092W 927 nt7.72□□□□□ -1.17
RPA49Q01080 YPL067CYPL067C 597 nt7.72□□□□□ -1.17
RPA49Q01080 TPI1YDR050C 747 nt7.71□□□□□ -1.18
RPA49Q01080 YDR327WYDR327W 327 nt7.71□□□□□ -1.18
RPA49Q01080 NAS6YGR232W 687 nt7.71□□□□□ -1.18
RPA49Q01080 TCB1YOR086C 3561 nt7.7□□□□□ -1.18
RPA49Q01080 YPL264CYPL264C 1062 nt7.7□□□□□ -1.18
RPA49Q01080 HXT9YJL219W 1704 nt7.69□□□□□ -1.18
RPA49Q01080 CYS3YAL012W 1185 nt7.69□□□□□ -1.18
RPA49Q01080 YOX1YML027W 1158 nt7.69□□□□□ -1.18
RPA49Q01080 PRS4YBL068W 981 nt7.69□□□□□ -1.18
RPA49Q01080 COS10YNR075W 1125 nt7.69□□□□□ -1.18
RPA49Q01080 CST26YBR042C 1194 nt7.68□□□□□ -1.18
RPA49Q01080 DCR2YLR361C 1737 nt7.68□□□□□ -1.18
RPA49Q01080 YLR030WYLR030W 792 nt7.67□□□□□ -1.18
RPA49Q01080 MBF1YOR298C-A 456 nt7.67□□□□□ -1.18
RPA49Q01080 DML1YMR211W 1428 nt7.67□□□□□ -1.18
RPA49Q01080 AFG3YER017C 2286 nt7.66□□□□□ -1.18
RPA49Q01080 YPQ2YDR352W 954 nt7.66□□□□□ -1.18
RPA49Q01080 NSG2YNL156C 900 nt7.66□□□□□ -1.18
RPA49Q01080 YER152CYER152C 1332 nt7.66□□□□□ -1.18
RPA49Q01080 CIT2YCR005C 1383 nt7.66□□□□□ -1.18
RPA49Q01080 GNA1YFL017C 480 nt7.65□□□□□ -1.18
RPA49Q01080 NFS1YCL017C 1494 nt7.64□□□□□ -1.19
RPA49Q01080 TUB1YML085C 1344 nt7.64□□□□□ -1.19
RPA49Q01080 PET117YER058W 324 nt7.64□□□□□ -1.19
RPA49Q01080 YGL260WYGL260W 231 nt7.63□□□□□ -1.19
RPA49Q01080 AIM46YHR199C 933 nt7.63□□□□□ -1.19
RPA49Q01080 URA1YKL216W 945 nt7.62□□□□□ -1.19
RPA49Q01080 YOR041CYOR041C 432 nt7.62□□□□□ -1.19
RPA49Q01080 MAL31YBR298C 1845 nt7.62□□□□□ -1.19
RPA49Q01080 PRC1YMR297W 1599 nt7.61□□□□□ -1.19
RPA49Q01080 CBK1YNL161W 2271 nt7.61□□□□□ -1.19
RPA49Q01080 TOP3YLR234W 1971 nt7.59□□□□□ -1.19
RPA49Q01080 SUF3tG(CCC)D 72 nt7.59□□□□□ -1.19
RPA49Q01080 YKL147CYKL147C 618 nt7.59□□□□□ -1.19
RPA49Q01080 DPM1YPR183W 804 nt7.59□□□□□ -1.19
RPA49Q01080 MPE1YKL059C 1326 nt7.58□□□□□ -1.2
RPA49Q01080 PDA1YER178W 1263 nt7.58□□□□□ -1.2
RPA49Q01080 AIM34YMR003W 597 nt7.58□□□□□ -1.2
RPA49Q01080 RTC4YNL254C 1206 nt7.58□□□□□ -1.2
RPA49Q01080 YPR130CYPR130C 408 nt7.58□□□□□ -1.2
RPA49Q01080 snR30snR30 606 nt7.58□□□□□ -1.2
RPA49Q01080 RDR1YOR380W 1641 nt7.58□□□□□ -1.2
RPA49Q01080 CDC23YHR166C 1881 nt7.58□□□□□ -1.2
RPA49Q01080 BEM1YBR200W 1656 nt7.57□□□□□ -1.2
RPA49Q01080 MSS51YLR203C 1311 nt7.57□□□□□ -1.2
RPA49Q01080 YHR131CYHR131C 2553 nt7.57□□□□□ -1.2
RPA49Q01080 TOM71YHR117W 1920 nt7.57□□□□□ -1.2
RPA49Q01080 LIP5YOR196C 1245 nt7.57□□□□□ -1.2
RPA49Q01080 LPD1YFL018C 1500 nt7.57□□□□□ -1.2
RPA49Q01080 GTS1YGL181W 1191 nt7.56□□□□□ -1.2
RPA49Q01080 YMR074CYMR074C 438 nt7.56□□□□□ -1.2
RPA49Q01080 GET4YOR164C 939 nt7.56□□□□□ -1.2
RPA49Q01080 CDC7YDL017W 1524 nt7.56□□□□□ -1.2
RPA49Q01080 ITR1YDR497C 1755 nt7.56□□□□□ -1.2
RPA49Q01080 NAF1YNL124W 1479 nt7.55□□□□□ -1.2
RPA49Q01080 SPE4YLR146C 903 nt7.55□□□□□ -1.2
RPA49Q01080 MCP1YOR228C 909 nt7.55□□□□□ -1.2
RPA49Q01080 YLR173WYLR173W 1827 nt7.55□□□□□ -1.2
RPA49Q01080 YLR162WYLR162W 357 nt7.54□□□□□ -1.2
RPA49Q01080 ZIM17YNL310C 525 nt7.54□□□□□ -1.2
RPA49Q01080 RPL43AYPR043W 279 nt7.53□□□□□ -1.2
RPA49Q01080 FLC2YAL053W 2352 nt7.53□□□□□ -1.2
RPA49Q01080 CIA1YDR267C 993 nt7.52□□□□□ -1.21
RPA49Q01080 LGE1YPL055C 999 nt7.52□□□□□ -1.21
RPA49Q01080 PLB2YMR006C 2121 nt7.52□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms