Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 SNRNP70-209ENST00000601065 1757 ntTSL 329.32■■■□□ 2.284e-9■■□□□ 13
HNRNPUQ00839 SNRNP70-202ENST00000401730 3144 ntTSL 223.88■■□□□ 1.414e-9■■□□□ 13
HNRNPUQ00839 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)22.08■■□□□ 1.134e-9■■□□□ 13
HNRNPUQ00839 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.763e-7■■□□□ 12.9
HNRNPUQ00839 ULK1-205ENST00000541761 1262 ntTSL 220.22■□□□□ 0.833e-7■■□□□ 12.9
HNRNPUQ00839 GPT2-204ENST00000562801 2092 ntTSL 220.71■□□□□ 0.915e-7■■□□□ 12.9
HNRNPUQ00839 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.735e-7■■□□□ 12.9
HNRNPUQ00839 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC17.25■□□□□ 0.355e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.47■■■□□ 2.313e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.35■■■□□ 2.293e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC25.3■■□□□ 1.643e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-219ENST00000601336 754 ntTSL 225.13■■□□□ 1.613e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.033e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)20.72■□□□□ 0.913e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)20.35■□□□□ 0.853e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC20.31■□□□□ 0.843e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.633e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC18.63■□□□□ 0.573e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC16.63■□□□□ 0.253e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-218ENST00000601309 672 ntTSL 516.56■□□□□ 0.243e-7■■□□□ 12.9
HNRNPUQ00839 HNRNPUL1-211ENST00000597725 573 ntTSL 412.17□□□□□ -0.463e-7■■□□□ 12.9
HNRNPUQ00839 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC19.12■□□□□ 0.652e-6■■□□□ 12.8
HNRNPUQ00839 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC18.61■□□□□ 0.572e-6■■□□□ 12.8
HNRNPUQ00839 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.432e-6■■□□□ 12.8
HNRNPUQ00839 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.42e-6■■□□□ 12.8
HNRNPUQ00839 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -02e-6■■□□□ 12.8
HNRNPUQ00839 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC14.89□□□□□ -0.032e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-209ENST00000484188 854 ntTSL 529.77■■■□□ 2.362e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC21.51■■□□□ 1.032e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.892e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.842e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-208ENST00000481809 872 ntTSL 520.12■□□□□ 0.812e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-210ENST00000484318 971 ntTSL 519.61■□□□□ 0.732e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.692e-6■■□□□ 12.8
HNRNPUQ00839 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC18.95■□□□□ 0.622e-6■■□□□ 12.8
HNRNPUQ00839 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC10.18□□□□□ -0.783e-8■■□□□ 12.8
HNRNPUQ00839 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.863e-8■■□□□ 12.8
HNRNPUQ00839 MGST1-218ENST00000543076 406 ntTSL 318.08■□□□□ 0.485e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-213ENST00000539036 566 ntTSL 413.06□□□□□ -0.325e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.345e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-217ENST00000542256 933 ntTSL 1 (best)12.71□□□□□ -0.375e-7■■□□□ 12.7
HNRNPUQ00839 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC9.56□□□□□ -0.885e-7■■□□□ 12.7
HNRNPUQ00839 AC016831.1-203ENST00000418546 578 ntTSL 49.12□□□□□ -0.955e-7■■□□□ 12.7
HNRNPUQ00839 AC016831.1-202ENST00000447307 726 ntTSL 38.55□□□□□ -1.045e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.125e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-208ENST00000535624 655 ntTSL 27.48□□□□□ -1.215e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-214ENST00000539708 700 ntTSL 27.48□□□□□ -1.215e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.235e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.245e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.82□□□□□ -1.325e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-209ENST00000536371 298 ntTSL 55.72□□□□□ -1.495e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.57□□□□□ -1.525e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-211ENST00000538857 535 ntTSL 35.1□□□□□ -1.595e-7■■□□□ 12.7
HNRNPUQ00839 MGST1-216ENST00000540126 365 ntTSL 24.29□□□□□ -1.725e-7■■□□□ 12.7
HNRNPUQ00839 SAMD4A-207ENST00000555112 2287 ntTSL 1 (best)29.76■■■□□ 2.354e-7■■□□□ 12.7
HNRNPUQ00839 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.174e-7■■□□□ 12.7
HNRNPUQ00839 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC18.67■□□□□ 0.584e-7■■□□□ 12.7
HNRNPUQ00839 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.494e-7■■□□□ 12.7
HNRNPUQ00839 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC17.61■□□□□ 0.414e-7■■□□□ 12.7
HNRNPUQ00839 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.272e-6■■□□□ 12.7
HNRNPUQ00839 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.332e-6■■□□□ 12.7
HNRNPUQ00839 XPO1-211ENST00000451765 643 ntTSL 319.05■□□□□ 0.641e-9■■□□□ 12.7
HNRNPUQ00839 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.871e-9■■□□□ 12.7
HNRNPUQ00839 SRSF6-202ENST00000483871 1680 ntTSL 218.61■□□□□ 0.573e-10■■□□□ 12.6
HNRNPUQ00839 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.353e-10■■□□□ 12.6
HNRNPUQ00839 TRIP12-202ENST00000343290 583 ntTSL 321.59■■□□□ 1.056e-7■■□□□ 12.6
HNRNPUQ00839 TRIP12-215ENST00000479037 2938 ntTSL 1 (best)19.15■□□□□ 0.666e-7■■□□□ 12.6
HNRNPUQ00839 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC16.95■□□□□ 0.36e-7■■□□□ 12.6
HNRNPUQ00839 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC14.44□□□□□ -0.16e-7■■□□□ 12.6
HNRNPUQ00839 TRIP12-209ENST00000435716 603 ntTSL 311.53□□□□□ -0.566e-7■■□□□ 12.6
HNRNPUQ00839 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.946e-7■■□□□ 12.6
HNRNPUQ00839 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.076e-7■■□□□ 12.6
HNRNPUQ00839 PAH-208ENST00000549247 961 ntTSL 27.92□□□□□ -1.141e-6■■□□□ 12.6
HNRNPUQ00839 PAH-218ENST00000635528 960 ntTSL 36.78□□□□□ -1.321e-6■■□□□ 12.6
HNRNPUQ00839 PAH-211ENST00000551114 1109 ntTSL 26.09□□□□□ -1.431e-6■■□□□ 12.6
HNRNPUQ00839 PAH-216ENST00000635477 429 ntTSL 55.86□□□□□ -1.471e-6■■□□□ 12.6
HNRNPUQ00839 MEG3-210ENST00000452120 4489 ntTSL 216.14■□□□□ 0.171e-7■■□□□ 12.5
HNRNPUQ00839 TF-211ENST00000485977 580 ntTSL 324.29■■□□□ 1.487e-7■■□□□ 12.4
HNRNPUQ00839 TF-203ENST00000460531 577 ntTSL 424.29■■□□□ 1.487e-7■■□□□ 12.4
HNRNPUQ00839 TF-213ENST00000494430 594 ntTSL 424.29■■□□□ 1.487e-7■■□□□ 12.4
HNRNPUQ00839 TF-202ENST00000414694 546 ntTSL 424.29■■□□□ 1.487e-7■■□□□ 12.4
HNRNPUQ00839 TF-212ENST00000493011 999 ntTSL 224.29■■□□□ 1.487e-7■■□□□ 12.4
HNRNPUQ00839 TF-210ENST00000482271 659 ntTSL 424.29■■□□□ 1.487e-7■■□□□ 12.4
HNRNPUQ00839 TF-208ENST00000474287 645 ntTSL 222.2■■□□□ 1.147e-7■■□□□ 12.4
HNRNPUQ00839 TF-206ENST00000466911 526 ntTSL 420.12■□□□□ 0.817e-7■■□□□ 12.4
HNRNPUQ00839 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.287e-7■■□□□ 12.4
HNRNPUQ00839 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)16.51■□□□□ 0.237e-7■■□□□ 12.4
HNRNPUQ00839 TRIP12-208ENST00000430954 719 ntTSL 215.8■□□□□ 0.127e-7■■□□□ 12.4
HNRNPUQ00839 TF-209ENST00000475382 586 ntTSL 412.19□□□□□ -0.467e-7■■□□□ 12.4
HNRNPUQ00839 TF-214ENST00000498622 719 ntTSL 29.95□□□□□ -0.827e-7■■□□□ 12.4
HNRNPUQ00839 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.14□□□□□ -1.117e-7■■□□□ 12.4
HNRNPUQ00839 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.674e-7■■□□□ 12.4
HNRNPUQ00839 NOL3-206ENST00000564992 677 ntAPPRIS ALT2 TSL 225.2■■□□□ 1.624e-7■■□□□ 12.4
HNRNPUQ00839 NOL3-203ENST00000563439 642 ntAPPRIS ALT2 TSL 325.08■■□□□ 1.614e-7■■□□□ 12.4
HNRNPUQ00839 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.82■■□□□ 1.44e-7■■□□□ 12.4
HNRNPUQ00839 NOL3-208ENST00000565645 519 ntTSL 423.36■■□□□ 1.334e-7■■□□□ 12.4
HNRNPUQ00839 NOL3-207ENST00000565560 579 ntAPPRIS ALT2 TSL 321.87■■□□□ 1.094e-7■■□□□ 12.4
HNRNPUQ00839 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.226e-7■■□□□ 12.4
HNRNPUQ00839 C2orf72-202ENST00000463834 3141 ntTSL 1 (best)16.54■□□□□ 0.244e-6■■□□□ 12.3
HNRNPUQ00839 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.22e-6■■□□□ 12.3
Retrieved 100 of 2,288 protein–RNA pairs in 109.9 ms