Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDX1P52945 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDX1P52945 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDX1P52945 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDX1P52945 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDX1P52945 U85056.1-201ENST00000616429 682 ntBASIC24.48■■□□□ 1.51
PDX1P52945 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
PDX1P52945 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDX1P52945 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.47■■□□□ 1.51
PDX1P52945 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDX1P52945 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
PDX1P52945 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
PDX1P52945 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.46■■□□□ 1.51
PDX1P52945 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDX1P52945 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDX1P52945 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.46■■□□□ 1.51
PDX1P52945 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PDX1P52945 AC018358.1-201ENST00000631079 1402 ntBASIC24.45■■□□□ 1.51
PDX1P52945 AC092296.2-201ENST00000589470 999 ntBASIC24.45■■□□□ 1.5
PDX1P52945 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PDX1P52945 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PDX1P52945 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.45■■□□□ 1.5
PDX1P52945 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDX1P52945 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDX1P52945 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDX1P52945 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.44■■□□□ 1.5
PDX1P52945 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.44■■□□□ 1.5
PDX1P52945 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PDX1P52945 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.43■■□□□ 1.5
PDX1P52945 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PDX1P52945 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.43■■□□□ 1.5
PDX1P52945 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDX1P52945 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDX1P52945 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PDX1P52945 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.42■■□□□ 1.5
PDX1P52945 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.42■■□□□ 1.5
PDX1P52945 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.42■■□□□ 1.5
PDX1P52945 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PDX1P52945 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDX1P52945 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDX1P52945 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
PDX1P52945 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.41■■□□□ 1.5
PDX1P52945 AL033527.3-201ENST00000566366 1196 ntBASIC24.41■■□□□ 1.5
PDX1P52945 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDX1P52945 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDX1P52945 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDX1P52945 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PDX1P52945 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
PDX1P52945 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDX1P52945 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PDX1P52945 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDX1P52945 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PDX1P52945 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PDX1P52945 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.38■■□□□ 1.49
PDX1P52945 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDX1P52945 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.38■■□□□ 1.49
PDX1P52945 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
PDX1P52945 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.38■■□□□ 1.49
PDX1P52945 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.37■■□□□ 1.49
PDX1P52945 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDX1P52945 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDX1P52945 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDX1P52945 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PDX1P52945 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.36■■□□□ 1.49
PDX1P52945 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDX1P52945 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDX1P52945 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDX1P52945 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDX1P52945 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PDX1P52945 KRT18P60-201ENST00000312876 1297 ntBASIC24.34■■□□□ 1.49
PDX1P52945 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDX1P52945 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDX1P52945 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.33■■□□□ 1.49
PDX1P52945 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.33■■□□□ 1.49
PDX1P52945 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.33■■□□□ 1.48
PDX1P52945 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDX1P52945 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.32■■□□□ 1.48
PDX1P52945 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
PDX1P52945 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDX1P52945 ECEL1P2-201ENST00000461596 1295 ntBASIC24.32■■□□□ 1.48
PDX1P52945 AL157400.5-201ENST00000507624 621 ntBASIC24.32■■□□□ 1.48
PDX1P52945 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDX1P52945 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.31■■□□□ 1.48
PDX1P52945 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.3■■□□□ 1.48
PDX1P52945 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.3■■□□□ 1.48
PDX1P52945 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms