Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.34■■□□□ 1.01
COL8A2P25067 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.34■■□□□ 1.01
COL8A2P25067 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.34■■□□□ 1.01
COL8A2P25067 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.34■■□□□ 1.01
COL8A2P25067 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
COL8A2P25067 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL8A2P25067 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL8A2P25067 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.32■■□□□ 1
COL8A2P25067 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
COL8A2P25067 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COL8A2P25067 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL8A2P25067 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL8A2P25067 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL8A2P25067 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL8A2P25067 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.3■■□□□ 1
COL8A2P25067 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL8A2P25067 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL8A2P25067 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL8A2P25067 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.3■■□□□ 1
COL8A2P25067 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL8A2P25067 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL8A2P25067 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL8A2P25067 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.29■■□□□ 1
COL8A2P25067 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.29■■□□□ 1
COL8A2P25067 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.29■■□□□ 1
COL8A2P25067 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL8A2P25067 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL8A2P25067 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.28■■□□□ 1
COL8A2P25067 RARRES2P2-201ENST00000394842 485 ntBASIC21.28■■□□□ 1
COL8A2P25067 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
COL8A2P25067 RNF126P1-201ENST00000567452 1320 ntBASIC21.28■■□□□ 1
COL8A2P25067 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
COL8A2P25067 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.27■■□□□ 1
COL8A2P25067 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.27■■□□□ 1
COL8A2P25067 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL8A2P25067 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.27■□□□□ 0.99
COL8A2P25067 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL8A2P25067 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL8A2P25067 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL8A2P25067 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL8A2P25067 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL8A2P25067 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL8A2P25067 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL8A2P25067 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.24■□□□□ 0.99
COL8A2P25067 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL8A2P25067 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL8A2P25067 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL8A2P25067 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL8A2P25067 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL8A2P25067 AC060814.1-201ENST00000554326 538 ntBASIC21.23■□□□□ 0.99
COL8A2P25067 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.23■□□□□ 0.99
COL8A2P25067 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL8A2P25067 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.22■□□□□ 0.99
COL8A2P25067 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.21■□□□□ 0.99
COL8A2P25067 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL8A2P25067 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL8A2P25067 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL8A2P25067 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.2■□□□□ 0.98
COL8A2P25067 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL8A2P25067 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL8A2P25067 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL8A2P25067 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL8A2P25067 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL8A2P25067 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL8A2P25067 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL8A2P25067 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.19■□□□□ 0.98
COL8A2P25067 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.19■□□□□ 0.98
COL8A2P25067 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.19■□□□□ 0.98
COL8A2P25067 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL8A2P25067 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.19■□□□□ 0.98
COL8A2P25067 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL8A2P25067 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL8A2P25067 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.19■□□□□ 0.98
COL8A2P25067 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL8A2P25067 AP002414.2-202ENST00000590929 1450 ntBASIC21.19■□□□□ 0.98
COL8A2P25067 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL8A2P25067 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
COL8A2P25067 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL8A2P25067 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COL8A2P25067 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL8A2P25067 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
COL8A2P25067 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL8A2P25067 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL8A2P25067 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.18■□□□□ 0.98
COL8A2P25067 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL8A2P25067 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.18■□□□□ 0.98
COL8A2P25067 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
COL8A2P25067 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
COL8A2P25067 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL8A2P25067 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL8A2P25067 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL8A2P25067 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.16■□□□□ 0.98
COL8A2P25067 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
COL8A2P25067 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL8A2P25067 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL8A2P25067 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.15■□□□□ 0.98
COL8A2P25067 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL8A2P25067 ABHD17AP5-201ENST00000580133 923 ntBASIC21.15■□□□□ 0.98
COL8A2P25067 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL8A2P25067 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms