Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCL1P22362 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.75■■□□□ 1.07
CCL1P22362 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.75■■□□□ 1.07
CCL1P22362 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCL1P22362 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCL1P22362 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL1P22362 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL1P22362 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.73■■□□□ 1.07
CCL1P22362 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL1P22362 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCL1P22362 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCL1P22362 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCL1P22362 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCL1P22362 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.71■■□□□ 1.07
CCL1P22362 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCL1P22362 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCL1P22362 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCL1P22362 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCL1P22362 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCL1P22362 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.69■■□□□ 1.06
CCL1P22362 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.69■■□□□ 1.06
CCL1P22362 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCL1P22362 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCL1P22362 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCL1P22362 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCL1P22362 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CCL1P22362 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL1P22362 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL1P22362 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCL1P22362 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.67■■□□□ 1.06
CCL1P22362 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCL1P22362 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.67■■□□□ 1.06
CCL1P22362 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCL1P22362 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL1P22362 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCL1P22362 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.67■■□□□ 1.06
CCL1P22362 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL1P22362 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCL1P22362 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCL1P22362 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL1P22362 AC110285.7-201ENST00000624417 1536 ntBASIC21.66■■□□□ 1.06
CCL1P22362 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCL1P22362 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCL1P22362 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.66■■□□□ 1.06
CCL1P22362 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.66■■□□□ 1.06
CCL1P22362 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL1P22362 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL1P22362 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL1P22362 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL1P22362 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.65■■□□□ 1.06
CCL1P22362 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL1P22362 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCL1P22362 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL1P22362 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCL1P22362 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCL1P22362 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.64■■□□□ 1.05
CCL1P22362 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.64■■□□□ 1.05
CCL1P22362 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.64■■□□□ 1.05
CCL1P22362 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL1P22362 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCL1P22362 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL1P22362 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.63■■□□□ 1.05
CCL1P22362 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.63■■□□□ 1.05
CCL1P22362 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL1P22362 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL1P22362 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCL1P22362 AC021231.2-201ENST00000594613 730 ntBASIC21.62■■□□□ 1.05
CCL1P22362 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCL1P22362 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCL1P22362 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL1P22362 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL1P22362 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCL1P22362 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL1P22362 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.61■■□□□ 1.05
CCL1P22362 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCL1P22362 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.6■■□□□ 1.05
CCL1P22362 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.59■■□□□ 1.05
CCL1P22362 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCL1P22362 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCL1P22362 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.59■■□□□ 1.05
CCL1P22362 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.59■■□□□ 1.05
CCL1P22362 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.58■■□□□ 1.05
CCL1P22362 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCL1P22362 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCL1P22362 AL449106.1-201ENST00000608517 1980 ntBASIC21.57■■□□□ 1.04
CCL1P22362 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCL1P22362 DUX4L29-201ENST00000425409 679 ntBASIC21.57■■□□□ 1.04
CCL1P22362 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.57■■□□□ 1.04
CCL1P22362 AC091060.1-201ENST00000623524 1766 ntBASIC21.56■■□□□ 1.04
CCL1P22362 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.56■■□□□ 1.04
CCL1P22362 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCL1P22362 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL1P22362 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.55■■□□□ 1.04
CCL1P22362 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCL1P22362 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCL1P22362 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL1P22362 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL1P22362 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCL1P22362 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCL1P22362 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms