Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HNRNPCL4P0DMR1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
HNRNPCL4P0DMR1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
HNRNPCL4P0DMR1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.33■■□□□ 1.33
HNRNPCL4P0DMR1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.33■■□□□ 1.32
HNRNPCL4P0DMR1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
HNRNPCL4P0DMR1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
HNRNPCL4P0DMR1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HNRNPCL4P0DMR1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HNRNPCL4P0DMR1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HNRNPCL4P0DMR1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HNRNPCL4P0DMR1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
HNRNPCL4P0DMR1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.31■■□□□ 1.32
HNRNPCL4P0DMR1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HNRNPCL4P0DMR1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.3■■□□□ 1.32
HNRNPCL4P0DMR1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HNRNPCL4P0DMR1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HNRNPCL4P0DMR1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.3■■□□□ 1.32
HNRNPCL4P0DMR1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HNRNPCL4P0DMR1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HNRNPCL4P0DMR1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
HNRNPCL4P0DMR1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.29■■□□□ 1.32
HNRNPCL4P0DMR1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
HNRNPCL4P0DMR1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HNRNPCL4P0DMR1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.28■■□□□ 1.32
HNRNPCL4P0DMR1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.28■■□□□ 1.32
HNRNPCL4P0DMR1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HNRNPCL4P0DMR1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HNRNPCL4P0DMR1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.27■■□□□ 1.32
HNRNPCL4P0DMR1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HNRNPCL4P0DMR1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.27■■□□□ 1.32
HNRNPCL4P0DMR1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.27■■□□□ 1.32
HNRNPCL4P0DMR1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
HNRNPCL4P0DMR1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HNRNPCL4P0DMR1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
HNRNPCL4P0DMR1 AC021231.2-201ENST00000594613 730 ntBASIC23.26■■□□□ 1.31
HNRNPCL4P0DMR1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HNRNPCL4P0DMR1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL4P0DMR1 AC110285.7-201ENST00000624417 1536 ntBASIC23.25■■□□□ 1.31
HNRNPCL4P0DMR1 DUX4L29-201ENST00000425409 679 ntBASIC23.25■■□□□ 1.31
HNRNPCL4P0DMR1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL4P0DMR1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HNRNPCL4P0DMR1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HNRNPCL4P0DMR1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HNRNPCL4P0DMR1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HNRNPCL4P0DMR1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.23■■□□□ 1.31
HNRNPCL4P0DMR1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
HNRNPCL4P0DMR1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.23■■□□□ 1.31
HNRNPCL4P0DMR1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.22■■□□□ 1.31
HNRNPCL4P0DMR1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.22■■□□□ 1.31
HNRNPCL4P0DMR1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
HNRNPCL4P0DMR1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
HNRNPCL4P0DMR1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL4P0DMR1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.21■■□□□ 1.31
HNRNPCL4P0DMR1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.21■■□□□ 1.31
HNRNPCL4P0DMR1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL4P0DMR1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HNRNPCL4P0DMR1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL4P0DMR1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HNRNPCL4P0DMR1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
HNRNPCL4P0DMR1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HNRNPCL4P0DMR1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
HNRNPCL4P0DMR1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HNRNPCL4P0DMR1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.18■■□□□ 1.3
HNRNPCL4P0DMR1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HNRNPCL4P0DMR1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
HNRNPCL4P0DMR1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.17■■□□□ 1.3
HNRNPCL4P0DMR1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.17■■□□□ 1.3
HNRNPCL4P0DMR1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HNRNPCL4P0DMR1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HNRNPCL4P0DMR1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HNRNPCL4P0DMR1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HNRNPCL4P0DMR1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
HNRNPCL4P0DMR1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HNRNPCL4P0DMR1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HNRNPCL4P0DMR1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.16■■□□□ 1.3
HNRNPCL4P0DMR1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.16■■□□□ 1.3
HNRNPCL4P0DMR1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HNRNPCL4P0DMR1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HNRNPCL4P0DMR1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HNRNPCL4P0DMR1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HNRNPCL4P0DMR1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HNRNPCL4P0DMR1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HNRNPCL4P0DMR1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
HNRNPCL4P0DMR1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.14■■□□□ 1.29
HNRNPCL4P0DMR1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HNRNPCL4P0DMR1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.13■■□□□ 1.29
HNRNPCL4P0DMR1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.13■■□□□ 1.29
HNRNPCL4P0DMR1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.13■■□□□ 1.29
HNRNPCL4P0DMR1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HNRNPCL4P0DMR1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.12■■□□□ 1.29
HNRNPCL4P0DMR1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HNRNPCL4P0DMR1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HNRNPCL4P0DMR1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HNRNPCL4P0DMR1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HNRNPCL4P0DMR1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.1■■□□□ 1.29
HNRNPCL4P0DMR1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
HNRNPCL4P0DMR1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HNRNPCL4P0DMR1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HNRNPCL4P0DMR1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms