Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MRPL3P09001 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MRPL3P09001 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.46■■□□□ 1.19
MRPL3P09001 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
MRPL3P09001 AC135731.1-201ENST00000569415 2548 ntBASIC22.45■■□□□ 1.18
MRPL3P09001 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.45■■□□□ 1.18
MRPL3P09001 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MRPL3P09001 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
MRPL3P09001 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MRPL3P09001 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.45■■□□□ 1.18
MRPL3P09001 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MRPL3P09001 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MRPL3P09001 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MRPL3P09001 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MRPL3P09001 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MRPL3P09001 AC018358.1-201ENST00000631079 1402 ntBASIC22.44■■□□□ 1.18
MRPL3P09001 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
MRPL3P09001 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
MRPL3P09001 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
MRPL3P09001 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MRPL3P09001 SUZ12P1-203ENST00000578195 985 ntBASIC22.43■■□□□ 1.18
MRPL3P09001 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MRPL3P09001 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MRPL3P09001 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MRPL3P09001 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.42■■□□□ 1.18
MRPL3P09001 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
MRPL3P09001 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MRPL3P09001 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.42■■□□□ 1.18
MRPL3P09001 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.42■■□□□ 1.18
MRPL3P09001 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
MRPL3P09001 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MRPL3P09001 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MRPL3P09001 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MRPL3P09001 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.41■■□□□ 1.18
MRPL3P09001 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MRPL3P09001 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
MRPL3P09001 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.41■■□□□ 1.18
MRPL3P09001 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MRPL3P09001 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.4■■□□□ 1.18
MRPL3P09001 MIR6090-201ENST00000622481 60 ntBASIC22.4■■□□□ 1.18
MRPL3P09001 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MRPL3P09001 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
MRPL3P09001 AC108673.1-201ENST00000510422 1159 ntBASIC22.39■■□□□ 1.17
MRPL3P09001 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MRPL3P09001 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.38■■□□□ 1.17
MRPL3P09001 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
MRPL3P09001 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.38■■□□□ 1.17
MRPL3P09001 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
MRPL3P09001 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
MRPL3P09001 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.38■■□□□ 1.17
MRPL3P09001 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
MRPL3P09001 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MRPL3P09001 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MRPL3P09001 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MRPL3P09001 AC091060.1-201ENST00000623524 1766 ntBASIC22.37■■□□□ 1.17
MRPL3P09001 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
MRPL3P09001 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRPL3P09001 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MRPL3P09001 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MRPL3P09001 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.36■■□□□ 1.17
MRPL3P09001 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
MRPL3P09001 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.35■■□□□ 1.17
MRPL3P09001 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MRPL3P09001 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
MRPL3P09001 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MRPL3P09001 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MRPL3P09001 LINC00273-201ENST00000539813 1452 ntBASIC22.34■■□□□ 1.17
MRPL3P09001 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
MRPL3P09001 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.33■■□□□ 1.17
MRPL3P09001 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
MRPL3P09001 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
MRPL3P09001 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.32■■□□□ 1.16
MRPL3P09001 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MRPL3P09001 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MRPL3P09001 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MRPL3P09001 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MRPL3P09001 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.32■■□□□ 1.16
MRPL3P09001 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MRPL3P09001 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MRPL3P09001 DUX4L28-201ENST00000623687 678 ntBASIC22.31■■□□□ 1.16
MRPL3P09001 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
MRPL3P09001 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.31■■□□□ 1.16
MRPL3P09001 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MRPL3P09001 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.3■■□□□ 1.16
MRPL3P09001 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MRPL3P09001 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
MRPL3P09001 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MRPL3P09001 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MRPL3P09001 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MRPL3P09001 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MRPL3P09001 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MRPL3P09001 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.28■■□□□ 1.16
MRPL3P09001 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.27■■□□□ 1.16
MRPL3P09001 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
MRPL3P09001 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MRPL3P09001 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
MRPL3P09001 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MRPL3P09001 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.27■■□□□ 1.16
MRPL3P09001 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.27■■□□□ 1.16
MRPL3P09001 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms