Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
GYPBP06028 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GYPBP06028 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
GYPBP06028 AC018358.1-201ENST00000631079 1402 ntBASIC22.52■■□□□ 1.2
GYPBP06028 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GYPBP06028 LINC00273-201ENST00000539813 1452 ntBASIC22.52■■□□□ 1.2
GYPBP06028 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.52■■□□□ 1.2
GYPBP06028 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GYPBP06028 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
GYPBP06028 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
GYPBP06028 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
GYPBP06028 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GYPBP06028 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
GYPBP06028 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GYPBP06028 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GYPBP06028 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GYPBP06028 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GYPBP06028 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GYPBP06028 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
GYPBP06028 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.49■■□□□ 1.19
GYPBP06028 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
GYPBP06028 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GYPBP06028 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
GYPBP06028 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
GYPBP06028 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GYPBP06028 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GYPBP06028 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.47■■□□□ 1.19
GYPBP06028 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.47■■□□□ 1.19
GYPBP06028 MIR3665-201ENST00000578708 105 ntBASIC22.47■■□□□ 1.19
GYPBP06028 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GYPBP06028 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
GYPBP06028 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
GYPBP06028 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
GYPBP06028 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
GYPBP06028 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.46■■□□□ 1.19
GYPBP06028 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GYPBP06028 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
GYPBP06028 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
GYPBP06028 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GYPBP06028 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.44■■□□□ 1.18
GYPBP06028 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
GYPBP06028 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.44■■□□□ 1.18
GYPBP06028 AL449106.1-201ENST00000608517 1980 ntBASIC22.43■■□□□ 1.18
GYPBP06028 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
GYPBP06028 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
GYPBP06028 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GYPBP06028 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.42■■□□□ 1.18
GYPBP06028 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.42■■□□□ 1.18
GYPBP06028 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GYPBP06028 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.42■■□□□ 1.18
GYPBP06028 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
GYPBP06028 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
GYPBP06028 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
GYPBP06028 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
GYPBP06028 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.4■■□□□ 1.18
GYPBP06028 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.4■■□□□ 1.18
GYPBP06028 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
GYPBP06028 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.39■■□□□ 1.17
GYPBP06028 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.39■■□□□ 1.17
GYPBP06028 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
GYPBP06028 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
GYPBP06028 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
GYPBP06028 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
GYPBP06028 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.39■■□□□ 1.17
GYPBP06028 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
GYPBP06028 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
GYPBP06028 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
GYPBP06028 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.38■■□□□ 1.17
GYPBP06028 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
GYPBP06028 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
GYPBP06028 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GYPBP06028 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GYPBP06028 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GYPBP06028 AP006261.1-201ENST00000584783 668 ntBASIC22.37■■□□□ 1.17
GYPBP06028 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.37■■□□□ 1.17
GYPBP06028 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
GYPBP06028 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.36■■□□□ 1.17
GYPBP06028 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GYPBP06028 AC087741.3-201ENST00000624270 1347 ntBASIC22.35■■□□□ 1.17
GYPBP06028 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
GYPBP06028 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.35■■□□□ 1.17
GYPBP06028 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GYPBP06028 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
GYPBP06028 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
GYPBP06028 AC091060.1-201ENST00000623524 1766 ntBASIC22.34■■□□□ 1.17
GYPBP06028 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
GYPBP06028 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.33■■□□□ 1.17
GYPBP06028 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.32■■□□□ 1.16
GYPBP06028 AL162393.1-201ENST00000437852 946 ntBASIC22.32■■□□□ 1.16
GYPBP06028 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
GYPBP06028 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GYPBP06028 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.32■■□□□ 1.16
GYPBP06028 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.32■■□□□ 1.16
GYPBP06028 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
GYPBP06028 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.32■■□□□ 1.16
GYPBP06028 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
GYPBP06028 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.31■■□□□ 1.16
GYPBP06028 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GYPBP06028 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GYPBP06028 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms