Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.2■■■□□ 2.43
POLR3DP05423 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.2■■■□□ 2.43
POLR3DP05423 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
POLR3DP05423 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
POLR3DP05423 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
POLR3DP05423 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
POLR3DP05423 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
POLR3DP05423 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.17■■■□□ 2.42
POLR3DP05423 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
POLR3DP05423 MIR219A2-201ENST00000608502 1504 ntBASIC30.17■■■□□ 2.42
POLR3DP05423 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
POLR3DP05423 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
POLR3DP05423 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
POLR3DP05423 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
POLR3DP05423 AC022413.1-201ENST00000624602 984 ntBASIC30.16■■■□□ 2.42
POLR3DP05423 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
POLR3DP05423 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.15■■■□□ 2.42
POLR3DP05423 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
POLR3DP05423 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
POLR3DP05423 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.14■■■□□ 2.42
POLR3DP05423 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
POLR3DP05423 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.14■■■□□ 2.41
POLR3DP05423 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
POLR3DP05423 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.11■■■□□ 2.41
POLR3DP05423 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
POLR3DP05423 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
POLR3DP05423 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
POLR3DP05423 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
POLR3DP05423 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
POLR3DP05423 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.1■■■□□ 2.41
POLR3DP05423 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
POLR3DP05423 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
POLR3DP05423 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
POLR3DP05423 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.09■■■□□ 2.41
POLR3DP05423 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
POLR3DP05423 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.08■■■□□ 2.41
POLR3DP05423 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
POLR3DP05423 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
POLR3DP05423 RARRES2P2-201ENST00000394842 485 ntBASIC30.08■■■□□ 2.41
POLR3DP05423 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
POLR3DP05423 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.08■■■□□ 2.41
POLR3DP05423 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
POLR3DP05423 RNF126P1-201ENST00000567452 1320 ntBASIC30.07■■■□□ 2.4
POLR3DP05423 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
POLR3DP05423 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
POLR3DP05423 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
POLR3DP05423 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.06■■■□□ 2.4
POLR3DP05423 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
POLR3DP05423 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.06■■■□□ 2.4
POLR3DP05423 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
POLR3DP05423 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.05■■■□□ 2.4
POLR3DP05423 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
POLR3DP05423 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
POLR3DP05423 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
POLR3DP05423 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
POLR3DP05423 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
POLR3DP05423 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.03■■■□□ 2.4
POLR3DP05423 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.02■■■□□ 2.4
POLR3DP05423 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
POLR3DP05423 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
POLR3DP05423 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
POLR3DP05423 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
POLR3DP05423 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
POLR3DP05423 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
POLR3DP05423 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.01■■■□□ 2.39
POLR3DP05423 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.99■■■□□ 2.39
POLR3DP05423 AC060814.1-201ENST00000554326 538 ntBASIC29.99■■■□□ 2.39
POLR3DP05423 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.99■■■□□ 2.39
POLR3DP05423 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.98■■■□□ 2.39
POLR3DP05423 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
POLR3DP05423 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
POLR3DP05423 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
POLR3DP05423 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
POLR3DP05423 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
POLR3DP05423 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
POLR3DP05423 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.97■■■□□ 2.39
POLR3DP05423 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
POLR3DP05423 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.96■■■□□ 2.39
POLR3DP05423 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.95■■■□□ 2.39
POLR3DP05423 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
POLR3DP05423 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
POLR3DP05423 AP002414.2-202ENST00000590929 1450 ntBASIC29.94■■■□□ 2.38
POLR3DP05423 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
POLR3DP05423 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.93■■■□□ 2.38
POLR3DP05423 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.93■■■□□ 2.38
POLR3DP05423 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
POLR3DP05423 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
POLR3DP05423 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.93■■■□□ 2.38
POLR3DP05423 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
POLR3DP05423 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
POLR3DP05423 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
POLR3DP05423 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
POLR3DP05423 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.92■■■□□ 2.38
POLR3DP05423 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
POLR3DP05423 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.92■■■□□ 2.38
POLR3DP05423 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
POLR3DP05423 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
POLR3DP05423 AC126177.7-201ENST00000547904 679 ntBASIC29.91■■■□□ 2.38
POLR3DP05423 ABHD17AP5-201ENST00000580133 923 ntBASIC29.91■■■□□ 2.38
POLR3DP05423 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms