Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTN3O95197 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTN3O95197 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
RTN3O95197 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.55■■□□□ 1.84
RTN3O95197 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTN3O95197 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
RTN3O95197 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RTN3O95197 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTN3O95197 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RTN3O95197 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTN3O95197 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTN3O95197 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTN3O95197 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RTN3O95197 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RTN3O95197 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTN3O95197 AP002414.2-202ENST00000590929 1450 ntBASIC26.53■■□□□ 1.84
RTN3O95197 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTN3O95197 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.52■■□□□ 1.84
RTN3O95197 GPX1-201ENST00000419349 1106 ntBASIC26.52■■□□□ 1.84
RTN3O95197 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RTN3O95197 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTN3O95197 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.51■■□□□ 1.83
RTN3O95197 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTN3O95197 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTN3O95197 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
RTN3O95197 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.5■■□□□ 1.83
RTN3O95197 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTN3O95197 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RTN3O95197 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RTN3O95197 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.49■■□□□ 1.83
RTN3O95197 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.49■■□□□ 1.83
RTN3O95197 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RTN3O95197 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTN3O95197 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTN3O95197 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RTN3O95197 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTN3O95197 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTN3O95197 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTN3O95197 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.48■■□□□ 1.83
RTN3O95197 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.48■■□□□ 1.83
RTN3O95197 AC022413.1-201ENST00000624602 984 ntBASIC26.48■■□□□ 1.83
RTN3O95197 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTN3O95197 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTN3O95197 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTN3O95197 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTN3O95197 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTN3O95197 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RTN3O95197 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTN3O95197 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTN3O95197 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTN3O95197 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTN3O95197 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RTN3O95197 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RTN3O95197 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RTN3O95197 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
RTN3O95197 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.43■■□□□ 1.82
RTN3O95197 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.43■■□□□ 1.82
RTN3O95197 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTN3O95197 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.43■■□□□ 1.82
RTN3O95197 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTN3O95197 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTN3O95197 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.42■■□□□ 1.82
RTN3O95197 RNF126P1-201ENST00000567452 1320 ntBASIC26.4■■□□□ 1.82
RTN3O95197 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RTN3O95197 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTN3O95197 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTN3O95197 AC126177.7-201ENST00000547904 679 ntBASIC26.4■■□□□ 1.82
RTN3O95197 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.4■■□□□ 1.82
RTN3O95197 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RTN3O95197 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTN3O95197 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTN3O95197 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.39■■□□□ 1.82
RTN3O95197 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RTN3O95197 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.39■■□□□ 1.82
RTN3O95197 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.39■■□□□ 1.82
RTN3O95197 AC060814.1-201ENST00000554326 538 ntBASIC26.39■■□□□ 1.82
RTN3O95197 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.39■■□□□ 1.82
RTN3O95197 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTN3O95197 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RTN3O95197 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RTN3O95197 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTN3O95197 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RTN3O95197 RARRES2P2-201ENST00000394842 485 ntBASIC26.37■■□□□ 1.81
RTN3O95197 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.37■■□□□ 1.81
RTN3O95197 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTN3O95197 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.37■■□□□ 1.81
RTN3O95197 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTN3O95197 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTN3O95197 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
RTN3O95197 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.35■■□□□ 1.81
RTN3O95197 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTN3O95197 AC018358.1-201ENST00000631079 1402 ntBASIC26.34■■□□□ 1.81
RTN3O95197 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTN3O95197 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTN3O95197 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RTN3O95197 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTN3O95197 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.33■■□□□ 1.81
RTN3O95197 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RTN3O95197 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.33■■□□□ 1.81
RTN3O95197 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms