Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA3O95167 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.13■□□□□ 0.81
NDUFA3O95167 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA3O95167 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA3O95167 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA3O95167 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.12■□□□□ 0.81
NDUFA3O95167 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.12■□□□□ 0.81
NDUFA3O95167 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.12■□□□□ 0.81
NDUFA3O95167 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA3O95167 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NDUFA3O95167 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.11■□□□□ 0.81
NDUFA3O95167 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.11■□□□□ 0.81
NDUFA3O95167 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NDUFA3O95167 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NDUFA3O95167 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NDUFA3O95167 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA3O95167 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA3O95167 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.1■□□□□ 0.81
NDUFA3O95167 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA3O95167 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFA3O95167 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.09■□□□□ 0.81
NDUFA3O95167 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFA3O95167 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFA3O95167 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA3O95167 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.08■□□□□ 0.81
NDUFA3O95167 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.07■□□□□ 0.8
NDUFA3O95167 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA3O95167 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NDUFA3O95167 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA3O95167 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA3O95167 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA3O95167 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.07■□□□□ 0.8
NDUFA3O95167 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA3O95167 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA3O95167 AC008813.1-201ENST00000536597 885 ntBASIC20.06■□□□□ 0.8
NDUFA3O95167 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NDUFA3O95167 CR559946.2-201ENST00000623684 991 ntBASIC20.06■□□□□ 0.8
NDUFA3O95167 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA3O95167 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NDUFA3O95167 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFA3O95167 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NDUFA3O95167 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFA3O95167 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NDUFA3O95167 MIR7108-201ENST00000614319 87 ntBASIC20.04■□□□□ 0.8
NDUFA3O95167 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NDUFA3O95167 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFA3O95167 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA3O95167 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA3O95167 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA3O95167 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NDUFA3O95167 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NDUFA3O95167 MIR3648-2-201ENST00000581792 180 ntBASIC20.03■□□□□ 0.8
NDUFA3O95167 MIR3648-1-201ENST00000615959 180 ntBASIC20.03■□□□□ 0.8
NDUFA3O95167 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.03■□□□□ 0.8
NDUFA3O95167 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA3O95167 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA3O95167 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA3O95167 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.03■□□□□ 0.8
NDUFA3O95167 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFA3O95167 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFA3O95167 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFA3O95167 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.01■□□□□ 0.79
NDUFA3O95167 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFA3O95167 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFA3O95167 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFA3O95167 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFA3O95167 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFA3O95167 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFA3O95167 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20■□□□□ 0.79
NDUFA3O95167 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFA3O95167 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFA3O95167 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA3O95167 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NDUFA3O95167 AC148477.6-201ENST00000623746 465 ntBASIC19.98■□□□□ 0.79
NDUFA3O95167 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NDUFA3O95167 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NDUFA3O95167 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.97■□□□□ 0.79
NDUFA3O95167 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA3O95167 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.97■□□□□ 0.79
NDUFA3O95167 AC016575.1-201ENST00000607026 382 ntBASIC19.97■□□□□ 0.79
NDUFA3O95167 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA3O95167 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.97■□□□□ 0.79
NDUFA3O95167 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NDUFA3O95167 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFA3O95167 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFA3O95167 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFA3O95167 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NDUFA3O95167 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NDUFA3O95167 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFA3O95167 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFA3O95167 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFA3O95167 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
NDUFA3O95167 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFA3O95167 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NDUFA3O95167 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NDUFA3O95167 HLA-V-202ENST00000446817 847 ntBASIC19.94■□□□□ 0.78
NDUFA3O95167 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NDUFA3O95167 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NDUFA3O95167 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NDUFA3O95167 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms