Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.84■■■□□ 2.21
SPDYE3A6NKU9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SPDYE3A6NKU9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPDYE3A6NKU9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPDYE3A6NKU9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPDYE3A6NKU9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SPDYE3A6NKU9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPDYE3A6NKU9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
SPDYE3A6NKU9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPDYE3A6NKU9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SPDYE3A6NKU9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.77■■■□□ 2.2
SPDYE3A6NKU9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
SPDYE3A6NKU9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SPDYE3A6NKU9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 DRD5P2-201ENST00000421395 2012 ntBASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
SPDYE3A6NKU9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SPDYE3A6NKU9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
SPDYE3A6NKU9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SPDYE3A6NKU9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
SPDYE3A6NKU9 HSD17B1P1-201ENST00000590052 955 ntBASIC28.73■■■□□ 2.19
SPDYE3A6NKU9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SPDYE3A6NKU9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SPDYE3A6NKU9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPDYE3A6NKU9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SPDYE3A6NKU9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.7■■■□□ 2.18
SPDYE3A6NKU9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
SPDYE3A6NKU9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
SPDYE3A6NKU9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SPDYE3A6NKU9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.69■■■□□ 2.18
SPDYE3A6NKU9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SPDYE3A6NKU9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 AC018358.1-201ENST00000631079 1402 ntBASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPDYE3A6NKU9 GPX1-201ENST00000419349 1106 ntBASIC28.67■■■□□ 2.18
SPDYE3A6NKU9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.67■■■□□ 2.18
SPDYE3A6NKU9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.67■■■□□ 2.18
SPDYE3A6NKU9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 AC022413.1-201ENST00000624602 984 ntBASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE3A6NKU9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.65■■■□□ 2.18
SPDYE3A6NKU9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.65■■■□□ 2.18
SPDYE3A6NKU9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE3A6NKU9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.63■■■□□ 2.17
SPDYE3A6NKU9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.62■■■□□ 2.17
SPDYE3A6NKU9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 AC126177.7-201ENST00000547904 679 ntBASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPDYE3A6NKU9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms