Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.61■■□□□ 1.21
TRGV8A0A0C4DH27 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRGV8A0A0C4DH27 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.61■■□□□ 1.21
TRGV8A0A0C4DH27 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.6■■□□□ 1.21
TRGV8A0A0C4DH27 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.6■■□□□ 1.21
TRGV8A0A0C4DH27 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRGV8A0A0C4DH27 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRGV8A0A0C4DH27 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRGV8A0A0C4DH27 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.59■■□□□ 1.21
TRGV8A0A0C4DH27 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRGV8A0A0C4DH27 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRGV8A0A0C4DH27 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRGV8A0A0C4DH27 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.57■■□□□ 1.2
TRGV8A0A0C4DH27 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRGV8A0A0C4DH27 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.56■■□□□ 1.2
TRGV8A0A0C4DH27 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRGV8A0A0C4DH27 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
TRGV8A0A0C4DH27 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRGV8A0A0C4DH27 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRGV8A0A0C4DH27 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRGV8A0A0C4DH27 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
TRGV8A0A0C4DH27 AL157400.5-201ENST00000507624 621 ntBASIC22.55■■□□□ 1.2
TRGV8A0A0C4DH27 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
TRGV8A0A0C4DH27 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRGV8A0A0C4DH27 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TRGV8A0A0C4DH27 DUX4L18-201ENST00000553347 1267 ntBASIC22.54■■□□□ 1.2
TRGV8A0A0C4DH27 AC007029.1-201ENST00000604183 313 ntBASIC22.54■■□□□ 1.2
TRGV8A0A0C4DH27 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRGV8A0A0C4DH27 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRGV8A0A0C4DH27 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 AC133552.2-201ENST00000619106 1032 ntBASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 AC129492.7-201ENST00000622992 756 ntBASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV8A0A0C4DH27 AL592293.1-201ENST00000502889 1188 ntBASIC22.51■■□□□ 1.19
TRGV8A0A0C4DH27 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRGV8A0A0C4DH27 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.5■■□□□ 1.19
TRGV8A0A0C4DH27 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRGV8A0A0C4DH27 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.5■■□□□ 1.19
TRGV8A0A0C4DH27 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.5■■□□□ 1.19
TRGV8A0A0C4DH27 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
TRGV8A0A0C4DH27 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRGV8A0A0C4DH27 AC009831.1-201ENST00000580420 1582 ntBASIC22.48■■□□□ 1.19
TRGV8A0A0C4DH27 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.48■■□□□ 1.19
TRGV8A0A0C4DH27 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRGV8A0A0C4DH27 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRGV8A0A0C4DH27 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRGV8A0A0C4DH27 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
TRGV8A0A0C4DH27 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.47■■□□□ 1.19
TRGV8A0A0C4DH27 SMPD5-203ENST00000639008 1464 ntBASIC22.47■■□□□ 1.19
TRGV8A0A0C4DH27 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV8A0A0C4DH27 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV8A0A0C4DH27 AL359258.2-201ENST00000564063 1566 ntBASIC22.46■■□□□ 1.19
TRGV8A0A0C4DH27 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV8A0A0C4DH27 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV8A0A0C4DH27 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TRGV8A0A0C4DH27 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.45■■□□□ 1.18
TRGV8A0A0C4DH27 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV8A0A0C4DH27 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV8A0A0C4DH27 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV8A0A0C4DH27 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.44■■□□□ 1.18
TRGV8A0A0C4DH27 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.43■■□□□ 1.18
TRGV8A0A0C4DH27 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.43■■□□□ 1.18
TRGV8A0A0C4DH27 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV8A0A0C4DH27 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV8A0A0C4DH27 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
TRGV8A0A0C4DH27 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.42■■□□□ 1.18
TRGV8A0A0C4DH27 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV8A0A0C4DH27 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV8A0A0C4DH27 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRGV8A0A0C4DH27 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV8A0A0C4DH27 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 299.7 ms