RNA–Protein interactions for RNA: ENST00000641532.1

SAMMSON-217, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,657 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-217ENST00000641532 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
SAMMSON-217ENST00000641532 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
SAMMSON-217ENST00000641532 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
SAMMSON-217ENST00000641532 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
SAMMSON-217ENST00000641532 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
SAMMSON-217ENST00000641532 FOXD1Q16676 465 aa18.25■□□□□ 0.51
SAMMSON-217ENST00000641532 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
SAMMSON-217ENST00000641532 ADRA2BP18089 450 aa17.92■□□□□ 0.46
SAMMSON-217ENST00000641532 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
SAMMSON-217ENST00000641532 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
SAMMSON-217ENST00000641532 KCNA4P22459 653 aa17.62■□□□□ 0.41
SAMMSON-217ENST00000641532 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
SAMMSON-217ENST00000641532 MSH5O43196 834 aa17.39■□□□□ 0.37
SAMMSON-217ENST00000641532 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
SAMMSON-217ENST00000641532 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
SAMMSON-217ENST00000641532 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
SAMMSON-217ENST00000641532 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
SAMMSON-217ENST00000641532 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
SAMMSON-217ENST00000641532 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
SAMMSON-217ENST00000641532 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
SAMMSON-217ENST00000641532 ZBTB22O15209 634 aa16.25■□□□□ 0.19
SAMMSON-217ENST00000641532 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
SAMMSON-217ENST00000641532 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
SAMMSON-217ENST00000641532 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
SAMMSON-217ENST00000641532 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.15
SAMMSON-217ENST00000641532 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
SAMMSON-217ENST00000641532 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
SAMMSON-217ENST00000641532 ABCC9O60706 1549 aa15.58■□□□□ 0.08
SAMMSON-217ENST00000641532 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
SAMMSON-217ENST00000641532 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
SAMMSON-217ENST00000641532 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
SAMMSON-217ENST00000641532 AMER1Q5JTC6 1135 aaPredicted RBP15.41■□□□□ 0.06
SAMMSON-217ENST00000641532 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
SAMMSON-217ENST00000641532 SLC24A1O60721 1099 aa15.35■□□□□ 0.05
SAMMSON-217ENST00000641532 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
SAMMSON-217ENST00000641532 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
SAMMSON-217ENST00000641532 FKBP8Q14318 412 aa15.17■□□□□ 0.02
SAMMSON-217ENST00000641532 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
SAMMSON-217ENST00000641532 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
SAMMSON-217ENST00000641532 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
SAMMSON-217ENST00000641532 NACADO15069 1562 aa15.02■□□□□ -0
SAMMSON-217ENST00000641532 DCAF8L2P0C7V8 631 aa15.02□□□□□ -0.01
SAMMSON-217ENST00000641532 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.01
SAMMSON-217ENST00000641532 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.01
SAMMSON-217ENST00000641532 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
SAMMSON-217ENST00000641532 ATF5Q9Y2D1 282 aaPredicted RBP14.81□□□□□ -0.04
SAMMSON-217ENST00000641532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
SAMMSON-217ENST00000641532 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
SAMMSON-217ENST00000641532 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
SAMMSON-217ENST00000641532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
SAMMSON-217ENST00000641532 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
SAMMSON-217ENST00000641532 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
SAMMSON-217ENST00000641532 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
SAMMSON-217ENST00000641532 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
SAMMSON-217ENST00000641532 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
SAMMSON-217ENST00000641532 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
SAMMSON-217ENST00000641532 BICRAQ9NZM4 1560 aa14.52□□□□□ -0.09
SAMMSON-217ENST00000641532 ZNF219Q9P2Y4 722 aaPredicted RBP14.47□□□□□ -0.09
SAMMSON-217ENST00000641532 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.1
SAMMSON-217ENST00000641532 FBXO3Q9UK99 471 aa14.4□□□□□ -0.1
SAMMSON-217ENST00000641532 APLP2Q06481 763 aa14.37□□□□□ -0.11
SAMMSON-217ENST00000641532 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
SAMMSON-217ENST00000641532 PROM2Q8N271 834 aa14.28□□□□□ -0.12
SAMMSON-217ENST00000641532 MKRN4PQ13434 485 aaPredicted RBP14.23□□□□□ -0.13
SAMMSON-217ENST00000641532 VASPP50552 380 aaPredicted RBP14.19□□□□□ -0.14
SAMMSON-217ENST00000641532 PLCB2Q00722 1185 aa14.19□□□□□ -0.14
SAMMSON-217ENST00000641532 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
SAMMSON-217ENST00000641532 FBLN2P98095 1184 aa14.11□□□□□ -0.15
SAMMSON-217ENST00000641532 CC2D2AQ9P2K1 1620 aa14.09□□□□□ -0.15
SAMMSON-217ENST00000641532 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
SAMMSON-217ENST00000641532 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.17
SAMMSON-217ENST00000641532 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
SAMMSON-217ENST00000641532 POLA2Q14181 598 aa13.97□□□□□ -0.17
SAMMSON-217ENST00000641532 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
SAMMSON-217ENST00000641532 PKD2Q13563 968 aa13.95□□□□□ -0.18
SAMMSON-217ENST00000641532 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
SAMMSON-217ENST00000641532 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
SAMMSON-217ENST00000641532 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
SAMMSON-217ENST00000641532 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
SAMMSON-217ENST00000641532 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
SAMMSON-217ENST00000641532 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
SAMMSON-217ENST00000641532 CAPN15O75808 1086 aa13.82□□□□□ -0.2
SAMMSON-217ENST00000641532 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
SAMMSON-217ENST00000641532 MROH2BQ7Z745 1585 aa13.82□□□□□ -0.2
SAMMSON-217ENST00000641532 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
SAMMSON-217ENST00000641532 VSIG10Q8N0Z9 540 aa13.8□□□□□ -0.2
SAMMSON-217ENST00000641532 BCANQ96GW7 911 aa13.8□□□□□ -0.2
SAMMSON-217ENST00000641532 POTEHQ6S545 545 aa13.79□□□□□ -0.2
SAMMSON-217ENST00000641532 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
SAMMSON-217ENST00000641532 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
SAMMSON-217ENST00000641532 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
SAMMSON-217ENST00000641532 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
SAMMSON-217ENST00000641532 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
SAMMSON-217ENST00000641532 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
SAMMSON-217ENST00000641532 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
SAMMSON-217ENST00000641532 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
SAMMSON-217ENST00000641532 WIZO95785 1651 aa13.65□□□□□ -0.22
SAMMSON-217ENST00000641532 DSG3P32926 999 aa13.65□□□□□ -0.22
SAMMSON-217ENST00000641532 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
SAMMSON-217ENST00000641532 ABCB7O75027 752 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms