RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.57
SMARCA2-266ENST00000639760 HRCP23327 699 aa18.2■□□□□ 0.5
SMARCA2-266ENST00000639760 MYT1Q01538 1121 aa18.16■□□□□ 0.5
SMARCA2-266ENST00000639760 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
SMARCA2-266ENST00000639760 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
SMARCA2-266ENST00000639760 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
SMARCA2-266ENST00000639760 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
SMARCA2-266ENST00000639760 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
SMARCA2-266ENST00000639760 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
SMARCA2-266ENST00000639760 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
SMARCA2-266ENST00000639760 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
SMARCA2-266ENST00000639760 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
SMARCA2-266ENST00000639760 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
SMARCA2-266ENST00000639760 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
SMARCA2-266ENST00000639760 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
SMARCA2-266ENST00000639760 BCL11AQ9H165 835 aa16.77■□□□□ 0.28
SMARCA2-266ENST00000639760 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.28
SMARCA2-266ENST00000639760 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.27
SMARCA2-266ENST00000639760 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
SMARCA2-266ENST00000639760 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-266ENST00000639760 PRKCSHP14314 528 aaPredicted RBP16.62■□□□□ 0.25
SMARCA2-266ENST00000639760 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
SMARCA2-266ENST00000639760 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
SMARCA2-266ENST00000639760 ANP32EQ9BTT0 268 aa16.37■□□□□ 0.21
SMARCA2-266ENST00000639760 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
SMARCA2-266ENST00000639760 ERICH6Q7L0X2 663 aa16.32■□□□□ 0.2
SMARCA2-266ENST00000639760 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
SMARCA2-266ENST00000639760 CSRNP3Q8WYN3 585 aa16.16■□□□□ 0.18
SMARCA2-266ENST00000639760 APLP2Q06481 763 aa16.15■□□□□ 0.18
SMARCA2-266ENST00000639760 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
SMARCA2-266ENST00000639760 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
SMARCA2-266ENST00000639760 TSHZ2Q9NRE2 1034 aa15.98■□□□□ 0.15
SMARCA2-266ENST00000639760 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
SMARCA2-266ENST00000639760 CCER1Q8TC90 406 aaPredicted RBP15.94■□□□□ 0.14
SMARCA2-266ENST00000639760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
SMARCA2-266ENST00000639760 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
SMARCA2-266ENST00000639760 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
SMARCA2-266ENST00000639760 MIER1Q8N108 512 aa15.77■□□□□ 0.12
SMARCA2-266ENST00000639760 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
SMARCA2-266ENST00000639760 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
SMARCA2-266ENST00000639760 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
SMARCA2-266ENST00000639760 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
SMARCA2-266ENST00000639760 UBE2Q2Q8WVN8 375 aa15.46■□□□□ 0.06
SMARCA2-266ENST00000639760 MSH5O43196 834 aa15.45■□□□□ 0.06
SMARCA2-266ENST00000639760 DEKP35659 375 aaKnown RBP15.4■□□□□ 0.06
SMARCA2-266ENST00000639760 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
SMARCA2-266ENST00000639760 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
SMARCA2-266ENST00000639760 BCANQ96GW7 911 aa15.36■□□□□ 0.05
SMARCA2-266ENST00000639760 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
SMARCA2-266ENST00000639760 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
SMARCA2-266ENST00000639760 FKBP8Q14318 412 aa15.27■□□□□ 0.04
SMARCA2-266ENST00000639760 CCDC136Q96JN2 1154 aa15.27■□□□□ 0.04
SMARCA2-266ENST00000639760 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
SMARCA2-266ENST00000639760 NEFLP07196 543 aa15.17■□□□□ 0.02
SMARCA2-266ENST00000639760 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.02
SMARCA2-266ENST00000639760 ITGAEP38570 1179 aa15.12■□□□□ 0.01
SMARCA2-266ENST00000639760 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
SMARCA2-266ENST00000639760 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
SMARCA2-266ENST00000639760 PKNOX2Q96KN3 472 aa15.06■□□□□ 0
SMARCA2-266ENST00000639760 IL27Q8NEV9 243 aa15.03■□□□□ -0
SMARCA2-266ENST00000639760 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
SMARCA2-266ENST00000639760 NBR1Q14596 966 aa14.99□□□□□ -0.01
SMARCA2-266ENST00000639760 KCNH8Q96L42 1107 aa14.99□□□□□ -0.01
SMARCA2-266ENST00000639760 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
SMARCA2-266ENST00000639760 NOP58Q9Y2X3 529 aaKnown RBP14.95□□□□□ -0.02
SMARCA2-266ENST00000639760 ABCC9O60706 1549 aa14.94□□□□□ -0.02
SMARCA2-266ENST00000639760 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
SMARCA2-266ENST00000639760 RTL5Q5HYW3 569 aaPredicted RBP14.91□□□□□ -0.02
SMARCA2-266ENST00000639760 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
SMARCA2-266ENST00000639760 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
SMARCA2-266ENST00000639760 CEP162Q5TB80 1403 aa14.9□□□□□ -0.02
SMARCA2-266ENST00000639760 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
SMARCA2-266ENST00000639760 PAK3O75914 559 aaPredicted RBP14.83□□□□□ -0.04
SMARCA2-266ENST00000639760 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.04
SMARCA2-266ENST00000639760 PLEKHG5O94827 1062 aa14.83□□□□□ -0.04
SMARCA2-266ENST00000639760 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
SMARCA2-266ENST00000639760 C11orf95C9JLR9 678 aaPredicted RBP14.78□□□□□ -0.04
SMARCA2-266ENST00000639760 TRIM52Q96A61 297 aa14.77□□□□□ -0.05
SMARCA2-266ENST00000639760 DHX57Q6P158 1386 aaKnown RBP14.75□□□□□ -0.05
SMARCA2-266ENST00000639760 TNIKQ9UKE5 1360 aa14.75□□□□□ -0.05
SMARCA2-266ENST00000639760 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
SMARCA2-266ENST00000639760 GLIPR1L2Q4G1C9 344 aa14.71□□□□□ -0.05
SMARCA2-266ENST00000639760 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
SMARCA2-266ENST00000639760 PPP4R2Q9NY27 417 aa14.69□□□□□ -0.06
SMARCA2-266ENST00000639760 WASHC2CQ9Y4E1 1318 aa14.68□□□□□ -0.06
SMARCA2-266ENST00000639760 IRX6P78412 446 aaPredicted RBP14.68□□□□□ -0.06
SMARCA2-266ENST00000639760 IPO9Q96P70 1041 aaKnown RBP14.68□□□□□ -0.06
SMARCA2-266ENST00000639760 RSPH6AQ9H0K4 717 aa14.67□□□□□ -0.06
SMARCA2-266ENST00000639760 NACADO15069 1562 aa14.66□□□□□ -0.06
SMARCA2-266ENST00000639760 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
SMARCA2-266ENST00000639760 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
SMARCA2-266ENST00000639760 DDX10Q13206 875 aaKnown RBP14.63□□□□□ -0.07
SMARCA2-266ENST00000639760 ZMYND15Q9H091 742 aa14.63□□□□□ -0.07
SMARCA2-266ENST00000639760 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
SMARCA2-266ENST00000639760 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
SMARCA2-266ENST00000639760 BRPF3Q9ULD4 1205 aa14.61□□□□□ -0.07
SMARCA2-266ENST00000639760 ANP32CO43423 234 aa14.57□□□□□ -0.08
SMARCA2-266ENST00000639760 VSIG10Q8N0Z9 540 aa14.57□□□□□ -0.08
SMARCA2-266ENST00000639760 PPP1R15AO75807 674 aaPredicted RBP14.56□□□□□ -0.08
SMARCA2-266ENST00000639760 EEA1Q15075 1411 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms