RNA–Protein interactions for RNA: ENST00000633109.1

LINC01002-221, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 523 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-221ENST00000633109 AEBP2Q6ZN18 517 aaPredicted RBP14.93□□□□□ -0.02
LINC01002-221ENST00000633109 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
LINC01002-221ENST00000633109 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
LINC01002-221ENST00000633109 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
LINC01002-221ENST00000633109 FOXD1Q16676 465 aa12.01□□□□□ -0.49
LINC01002-221ENST00000633109 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
LINC01002-221ENST00000633109 MSH5O43196 834 aa11.48□□□□□ -0.57
LINC01002-221ENST00000633109 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
LINC01002-221ENST00000633109 PLPPR3Q6T4P5 718 aa10.86□□□□□ -0.67
LINC01002-221ENST00000633109 PPP6R1Q9UPN7 881 aa10.86□□□□□ -0.67
LINC01002-221ENST00000633109 ADRA2BP18089 450 aa10.85□□□□□ -0.67
LINC01002-221ENST00000633109 CACNB1Q02641 598 aaPredicted RBP10.17□□□□□ -0.78
LINC01002-221ENST00000633109 DMRT2Q9Y5R5 561 aa10.11□□□□□ -0.79
LINC01002-221ENST00000633109 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
LINC01002-221ENST00000633109 SCAF1Q9H7N4 1312 aaKnown RBP10□□□□□ -0.81
LINC01002-221ENST00000633109 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
LINC01002-221ENST00000633109 RNF39Q9H2S5 420 aa9.7□□□□□ -0.86
LINC01002-221ENST00000633109 C1QBPQ07021 282 aaKnown RBP9.56□□□□□ -0.88
LINC01002-221ENST00000633109 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
LINC01002-221ENST00000633109 NISCHQ9Y2I1 1504 aa9.5□□□□□ -0.89
LINC01002-221ENST00000633109 PPP4R3CPQ6ZMV5 832 aa9.45□□□□□ -0.9
LINC01002-221ENST00000633109 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
LINC01002-221ENST00000633109 CNKSR2Q8WXI2 1034 aa9.37□□□□□ -0.91
LINC01002-221ENST00000633109 POTEHQ6S545 545 aa9.28□□□□□ -0.92
LINC01002-221ENST00000633109 DNAJC5BQ9UF47 199 aa9.25□□□□□ -0.93
LINC01002-221ENST00000633109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.22□□□□□ -0.93
LINC01002-221ENST00000633109 CAPN15O75808 1086 aa9□□□□□ -0.97
LINC01002-221ENST00000633109 NCBP3Q53F19 620 aaKnown RBP9□□□□□ -0.97
LINC01002-221ENST00000633109 DSG3P32926 999 aa8.94□□□□□ -0.98
LINC01002-221ENST00000633109 SPINK5Q9NQ38 1064 aaPredicted RBP8.91□□□□□ -0.98
LINC01002-221ENST00000633109 U3KPZ7 1027 aaPredicted RBP8.88□□□□□ -0.99
LINC01002-221ENST00000633109 NPM3O75607 178 aaKnown RBP8.8□□□□□ -1
LINC01002-221ENST00000633109 ABCB7O75027 752 aa8.74□□□□□ -1.01
LINC01002-221ENST00000633109 TRHP20396 242 aaPredicted RBP8.74□□□□□ -1.01
LINC01002-221ENST00000633109 APLP2Q06481 763 aa8.69□□□□□ -1.02
LINC01002-221ENST00000633109 ZNF219Q9P2Y4 722 aaPredicted RBP8.68□□□□□ -1.02
LINC01002-221ENST00000633109 ABCC9O60706 1549 aa8.65□□□□□ -1.02
LINC01002-221ENST00000633109 CCDC180Q9P1Z9 1646 aa8.63□□□□□ -1.03
LINC01002-221ENST00000633109 RBM42Q9BTD8 480 aaKnown RBP8.62□□□□□ -1.03
LINC01002-221ENST00000633109 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
LINC01002-221ENST00000633109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.55□□□□□ -1.04
LINC01002-221ENST00000633109 HNRNPUL2Q1KMD3 747 aaKnown RBP8.55□□□□□ -1.04
LINC01002-221ENST00000633109 SP7Q8TDD2 431 aaPredicted RBP8.5□□□□□ -1.05
LINC01002-221ENST00000633109 SLC4A2P04920 1241 aa8.47□□□□□ -1.05
LINC01002-221ENST00000633109 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
LINC01002-221ENST00000633109 POLA2Q14181 598 aa8.35□□□□□ -1.07
LINC01002-221ENST00000633109 KCNA4P22459 653 aa8.33□□□□□ -1.08
LINC01002-221ENST00000633109 HAX1O00165 279 aa8.3□□□□□ -1.08
LINC01002-221ENST00000633109 AKT1S1Q96B36 256 aa8.28□□□□□ -1.08
LINC01002-221ENST00000633109 PIP4P2Q8N4L2 257 aa8.26□□□□□ -1.09
LINC01002-221ENST00000633109 RB1CC1Q8TDY2 1594 aa8.24□□□□□ -1.09
LINC01002-221ENST00000633109 MYCNP04198 464 aaPredicted RBP8.2□□□□□ -1.1
LINC01002-221ENST00000633109 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
LINC01002-221ENST00000633109 ZBTB12Q9Y330 459 aaPredicted RBP8.18□□□□□ -1.1
LINC01002-221ENST00000633109 NACADO15069 1562 aa8.18□□□□□ -1.1
LINC01002-221ENST00000633109 PITPNM1O00562 1244 aa8.13□□□□□ -1.11
LINC01002-221ENST00000633109 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
LINC01002-221ENST00000633109 FXR2P51116 673 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC01002-221ENST00000633109 MYO15BQ96JP2 1530 aa8.09□□□□□ -1.11
LINC01002-221ENST00000633109 EVX2Q03828 476 aa8.04□□□□□ -1.12
LINC01002-221ENST00000633109 BICRAQ9NZM4 1560 aa8.03□□□□□ -1.12
LINC01002-221ENST00000633109 SHROOM4Q9ULL8 1493 aa8.01□□□□□ -1.13
LINC01002-221ENST00000633109 UNC13AQ9UPW8 1703 aa8.01□□□□□ -1.13
LINC01002-221ENST00000633109 ATF5Q9Y2D1 282 aaPredicted RBP7.98□□□□□ -1.13
LINC01002-221ENST00000633109 LHX8Q68G74 356 aa7.97□□□□□ -1.13
LINC01002-221ENST00000633109 PABPN1Q86U42 306 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC01002-221ENST00000633109 PRKAR2AP13861 404 aaKnown RBP7.95□□□□□ -1.14
LINC01002-221ENST00000633109 PLSCR2Q9NRY7 297 aa7.94□□□□□ -1.14
LINC01002-221ENST00000633109 CLEC11AQ9Y240 323 aa7.92□□□□□ -1.14
LINC01002-221ENST00000633109 DCAF1Q9Y4B6 1507 aa7.92□□□□□ -1.14
LINC01002-221ENST00000633109 ZCCHC6Q5VYS8 1495 aaKnown RBP7.88□□□□□ -1.15
LINC01002-221ENST00000633109 GABBR2O75899 941 aa7.88□□□□□ -1.15
LINC01002-221ENST00000633109 SPDYE2BA6NHP3 402 aa7.86□□□□□ -1.15
LINC01002-221ENST00000633109 C19orf67A6NJJ6 358 aa7.86□□□□□ -1.15
LINC01002-221ENST00000633109 SPDYE6P0CI01 402 aa7.86□□□□□ -1.15
LINC01002-221ENST00000633109 SPDYE2Q495Y8 402 aa7.86□□□□□ -1.15
LINC01002-221ENST00000633109 SPDYE1Q8NFV5 336 aaPredicted RBP7.86□□□□□ -1.15
LINC01002-221ENST00000633109 FOXD4L1Q9NU39 408 aa7.86□□□□□ -1.15
LINC01002-221ENST00000633109 CECR2Q9BXF3 1484 aa7.85□□□□□ -1.15
LINC01002-221ENST00000633109 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
LINC01002-221ENST00000633109 EIF4G1Q04637 1599 aaKnown RBP7.83□□□□□ -1.16
LINC01002-221ENST00000633109 DCAF8L2P0C7V8 631 aa7.82□□□□□ -1.16
LINC01002-221ENST00000633109 FBLN2P98095 1184 aa7.82□□□□□ -1.16
LINC01002-221ENST00000633109 SLC4A1APQ9BWU0 796 aaKnown RBP7.8□□□□□ -1.16
LINC01002-221ENST00000633109 CHADLQ6NUI6 762 aa7.76□□□□□ -1.17
LINC01002-221ENST00000633109 SCRIBQ14160 1630 aa7.76□□□□□ -1.17
LINC01002-221ENST00000633109 ZNF692Q9BU19 519 aaPredicted RBP7.72□□□□□ -1.17
LINC01002-221ENST00000633109 ZBTB22O15209 634 aa7.71□□□□□ -1.18
LINC01002-221ENST00000633109 PRR29P0C7W0 189 aa7.69□□□□□ -1.18
LINC01002-221ENST00000633109 DNAJC5Q9H3Z4 198 aa7.69□□□□□ -1.18
LINC01002-221ENST00000633109 CD44P16070 742 aaKnown RBP7.68□□□□□ -1.18
LINC01002-221ENST00000633109 DCBLD2Q96PD2 775 aa7.67□□□□□ -1.18
LINC01002-221ENST00000633109 POTEIP0CG38 1075 aa7.65□□□□□ -1.18
LINC01002-221ENST00000633109 SSUH2Q9Y2M2 353 aa7.65□□□□□ -1.18
LINC01002-221ENST00000633109 CUX2O14529 1486 aa7.62□□□□□ -1.19
LINC01002-221ENST00000633109 ATXN8OSP0DMR3 200 aa7.62□□□□□ -1.19
LINC01002-221ENST00000633109 CLCN6P51797 869 aa7.61□□□□□ -1.19
LINC01002-221ENST00000633109 MKRN4PQ13434 485 aaPredicted RBP7.57□□□□□ -1.2
LINC01002-221ENST00000633109 FARP1Q9Y4F1 1045 aaPredicted RBP7.57□□□□□ -1.2
LINC01002-221ENST00000633109 POTEMA6NI47 508 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms