RNA–Protein interactions for RNA: ENST00000629840.2

LINC01125-253, human

TSL 5

Gene LINC01125, Length 782 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01125-253	ENST00000629840	CHIC1	Q5VXU3	224 aa		18.48	■□□□□ 0.55
LINC01125-253	ENST00000629840	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.36	■□□□□ 0.53
LINC01125-253	ENST00000629840	PHF23	Q9BUL5	403 aa	Predicted RBP	16.3	■□□□□ 0.2
LINC01125-253	ENST00000629840	SENP3	Q9H4L4	574 aa	Predicted RBP	15.55	■□□□□ 0.08
LINC01125-253	ENST00000629840	PLPPR3	Q6T4P5	718 aa		15.28	■□□□□ 0.04
LINC01125-253	ENST00000629840	FOXD1	Q16676	465 aa		14.61	□□□□□ -0.07
LINC01125-253	ENST00000629840	ADRA2B	P18089	450 aa		14.25	□□□□□ -0.13
LINC01125-253	ENST00000629840	PPP6R1	Q9UPN7	881 aa		14.18	□□□□□ -0.14
LINC01125-253	ENST00000629840	KCNA4	P22459	653 aa		13.88	□□□□□ -0.19
LINC01125-253	ENST00000629840	POTED	Q86YR6	584 aa		13.83	□□□□□ -0.2
LINC01125-253	ENST00000629840	NISCH	Q9Y2I1	1504 aa		13.77	□□□□□ -0.21
LINC01125-253	ENST00000629840	MSH5	O43196	834 aa		13.62	□□□□□ -0.23
LINC01125-253	ENST00000629840	EHMT2	Q96KQ7	1210 aa		13.61	□□□□□ -0.23
LINC01125-253	ENST00000629840	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC01125-253	ENST00000629840	PPP4R3CP	Q6ZMV5	832 aa		13.52	□□□□□ -0.25
LINC01125-253	ENST00000629840	NCBP3	Q53F19	620 aa	Known RBP	13.36	□□□□□ -0.27
LINC01125-253	ENST00000629840	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.33	□□□□□ -0.28
LINC01125-253	ENST00000629840	CSRNP3	Q8WYN3	585 aa		13.2	□□□□□ -0.3
LINC01125-253	ENST00000629840	NPM3	O75607	178 aa	Known RBP	13.15	□□□□□ -0.3
LINC01125-253	ENST00000629840	CNKSR2	Q8WXI2	1034 aa		13.03	□□□□□ -0.32
LINC01125-253	ENST00000629840	SCAF1	Q9H7N4	1312 aa	Known RBP	13.02	□□□□□ -0.33
LINC01125-253	ENST00000629840	ZBTB22	O15209	634 aa		12.78	□□□□□ -0.36
LINC01125-253	ENST00000629840	DNAJC5B	Q9UF47	199 aa		12.73	□□□□□ -0.37
LINC01125-253	ENST00000629840	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.69	□□□□□ -0.38
LINC01125-253	ENST00000629840	RNF216	Q9NWF9	866 aa	Predicted RBP	12.63	□□□□□ -0.39
LINC01125-253	ENST00000629840	FOXD4L1	Q9NU39	408 aa		12.62	□□□□□ -0.39
LINC01125-253	ENST00000629840	DMRT2	Q9Y5R5	561 aa		12.44	□□□□□ -0.42
LINC01125-253	ENST00000629840	HOXD11	P31277	338 aa	Predicted RBP	12.42	□□□□□ -0.42
LINC01125-253	ENST00000629840	SLC4A2	P04920	1241 aa		12.27	□□□□□ -0.45
LINC01125-253	ENST00000629840	MYCN	P04198	464 aa	Predicted RBP	12.15	□□□□□ -0.46
LINC01125-253	ENST00000629840	ATXN8OS	P0DMR3	200 aa		12.15	□□□□□ -0.46
LINC01125-253	ENST00000629840	CCDC180	Q9P1Z9	1646 aa		12.11	□□□□□ -0.47
LINC01125-253	ENST00000629840	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.91	□□□□□ -0.5
LINC01125-253	ENST00000629840	FKBP8	Q14318	412 aa		11.89	□□□□□ -0.51
LINC01125-253	ENST00000629840	RTN4	Q9NQC3	1192 aa	Known RBP	11.87	□□□□□ -0.51
LINC01125-253	ENST00000629840	DCAF8L1	A6NGE4	600 aa		11.85	□□□□□ -0.51
LINC01125-253	ENST00000629840	CACNB1	Q02641	598 aa	Predicted RBP	11.82	□□□□□ -0.52
LINC01125-253	ENST00000629840	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
LINC01125-253	ENST00000629840	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.78	□□□□□ -0.52
LINC01125-253	ENST00000629840	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.78	□□□□□ -0.52
LINC01125-253	ENST00000629840	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.76	□□□□□ -0.53
LINC01125-253	ENST00000629840	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.76	□□□□□ -0.53
LINC01125-253	ENST00000629840	ABCC9	O60706	1549 aa		11.71	□□□□□ -0.53
LINC01125-253	ENST00000629840	SLC24A1	O60721	1099 aa		11.7	□□□□□ -0.54
LINC01125-253	ENST00000629840		U3KPZ7	1027 aa	Predicted RBP	11.7	□□□□□ -0.54
LINC01125-253	ENST00000629840	RNF39	Q9H2S5	420 aa		11.67	□□□□□ -0.54
LINC01125-253	ENST00000629840	DCAF8L2	P0C7V8	631 aa		11.63	□□□□□ -0.55
LINC01125-253	ENST00000629840	APLP2	Q06481	763 aa		11.52	□□□□□ -0.57
LINC01125-253	ENST00000629840	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.51	□□□□□ -0.57
LINC01125-253	ENST00000629840	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.51	□□□□□ -0.57
LINC01125-253	ENST00000629840	C1QBP	Q07021	282 aa	Known RBP	11.42	□□□□□ -0.58
LINC01125-253	ENST00000629840	DCAF1	Q9Y4B6	1507 aa		11.35	□□□□□ -0.59
LINC01125-253	ENST00000629840	NACAD	O15069	1562 aa		11.34	□□□□□ -0.59
LINC01125-253	ENST00000629840	FBXO3	Q9UK99	471 aa		11.34	□□□□□ -0.59
LINC01125-253	ENST00000629840	RB1CC1	Q8TDY2	1594 aa		11.33	□□□□□ -0.6
LINC01125-253	ENST00000629840	SPDYE4	A6NLX3	237 aa		11.32	□□□□□ -0.6
LINC01125-253	ENST00000629840	MKRN4P	Q13434	485 aa	Predicted RBP	11.28	□□□□□ -0.6
LINC01125-253	ENST00000629840	MYO15B	Q96JP2	1530 aa		11.28	□□□□□ -0.6
LINC01125-253	ENST00000629840	FBLN2	P98095	1184 aa		11.25	□□□□□ -0.61
LINC01125-253	ENST00000629840	PROM2	Q8N271	834 aa		11.25	□□□□□ -0.61
LINC01125-253	ENST00000629840	TRH	P20396	242 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC01125-253	ENST00000629840	SHROOM4	Q9ULL8	1493 aa		11.19	□□□□□ -0.62
LINC01125-253	ENST00000629840	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.18	□□□□□ -0.62
LINC01125-253	ENST00000629840	POLA2	Q14181	598 aa		11.16	□□□□□ -0.62
LINC01125-253	ENST00000629840	SCRIB	Q14160	1630 aa		11.16	□□□□□ -0.62
LINC01125-253	ENST00000629840	VASP	P50552	380 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01125-253	ENST00000629840	CAPN15	O75808	1086 aa		11.1	□□□□□ -0.63
LINC01125-253	ENST00000629840	UNC13A	Q9UPW8	1703 aa		11.06	□□□□□ -0.64
LINC01125-253	ENST00000629840	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.06	□□□□□ -0.64
LINC01125-253	ENST00000629840	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.03	□□□□□ -0.64
LINC01125-253	ENST00000629840	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
LINC01125-253	ENST00000629840	PLCB2	Q00722	1185 aa		10.97	□□□□□ -0.65
LINC01125-253	ENST00000629840	ABCB7	O75027	752 aa		10.94	□□□□□ -0.66
LINC01125-253	ENST00000629840	BICRA	Q9NZM4	1560 aa		10.91	□□□□□ -0.66
LINC01125-253	ENST00000629840	PKD2	Q13563	968 aa		10.9	□□□□□ -0.66
LINC01125-253	ENST00000629840	DSG3	P32926	999 aa		10.88	□□□□□ -0.67
LINC01125-253	ENST00000629840	ZNF692	Q9BU19	519 aa	Predicted RBP	10.83	□□□□□ -0.68
LINC01125-253	ENST00000629840	STAG3	Q9UJ98	1225 aa		10.82	□□□□□ -0.68
LINC01125-253	ENST00000629840	SPOCK2	Q92563	424 aa		10.81	□□□□□ -0.68
LINC01125-253	ENST00000629840	KLHL34	Q8N239	644 aa		10.8	□□□□□ -0.68
LINC01125-253	ENST00000629840	SPDYE2B	A6NHP3	402 aa		10.79	□□□□□ -0.68
LINC01125-253	ENST00000629840	SPDYE6	P0CI01	402 aa		10.79	□□□□□ -0.68
LINC01125-253	ENST00000629840	HAP1	P54257	671 aa	Predicted RBP	10.79	□□□□□ -0.68
LINC01125-253	ENST00000629840	SPDYE2	Q495Y8	402 aa		10.79	□□□□□ -0.68
LINC01125-253	ENST00000629840	SSUH2	Q9Y2M2	353 aa		10.78	□□□□□ -0.68
LINC01125-253	ENST00000629840	POTEH	Q6S545	545 aa		10.76	□□□□□ -0.69
LINC01125-253	ENST00000629840	OSCAR	Q8IYS5	282 aa		10.75	□□□□□ -0.69
LINC01125-253	ENST00000629840	ECM2	O94769	699 aa	Predicted RBP	10.72	□□□□□ -0.69
LINC01125-253	ENST00000629840	PLCD3	Q8N3E9	789 aa		10.72	□□□□□ -0.69
LINC01125-253	ENST00000629840	CECR2	Q9BXF3	1484 aa		10.71	□□□□□ -0.69
LINC01125-253	ENST00000629840	SUPT5H	O00267	1087 aa	Known RBP	10.69	□□□□□ -0.7
LINC01125-253	ENST00000629840	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.68	□□□□□ -0.7
LINC01125-253	ENST00000629840	VSIG10	Q8N0Z9	540 aa		10.67	□□□□□ -0.7
LINC01125-253	ENST00000629840	BBX	Q8WY36	941 aa	Predicted RBP	10.67	□□□□□ -0.7
LINC01125-253	ENST00000629840	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.66	□□□□□ -0.7
LINC01125-253	ENST00000629840	EIF4G1	Q04637	1599 aa	Known RBP	10.65	□□□□□ -0.7
LINC01125-253	ENST00000629840	MIER1	Q8N108	512 aa		10.65	□□□□□ -0.7
LINC01125-253	ENST00000629840	SMARCA4	P51532	1647 aa		10.65	□□□□□ -0.7
LINC01125-253	ENST00000629840	MROH2B	Q7Z745	1585 aa		10.64	□□□□□ -0.71
LINC01125-253	ENST00000629840	NPM1	P06748	294 aa	Known RBP eCLIP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms