RNA–Protein interactions for RNA: ENST00000627136.2

TCF4-257, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-257ENST00000627136 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
TCF4-257ENST00000627136 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
TCF4-257ENST00000627136 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
TCF4-257ENST00000627136 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
TCF4-257ENST00000627136 FOXD1Q16676 465 aa16.3■□□□□ 0.2
TCF4-257ENST00000627136 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
TCF4-257ENST00000627136 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
TCF4-257ENST00000627136 ADRA2BP18089 450 aa15.39■□□□□ 0.05
TCF4-257ENST00000627136 PIAS4Q8N2W9 510 aaPredicted RBP15.34■□□□□ 0.05
TCF4-257ENST00000627136 MSH5O43196 834 aa15.23■□□□□ 0.03
TCF4-257ENST00000627136 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
TCF4-257ENST00000627136 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
TCF4-257ENST00000627136 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
TCF4-257ENST00000627136 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
TCF4-257ENST00000627136 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
TCF4-257ENST00000627136 CNKSR2Q8WXI2 1034 aa13.72□□□□□ -0.21
TCF4-257ENST00000627136 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
TCF4-257ENST00000627136 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
TCF4-257ENST00000627136 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
TCF4-257ENST00000627136 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
TCF4-257ENST00000627136 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
TCF4-257ENST00000627136 KCNA4P22459 653 aa13.3□□□□□ -0.28
TCF4-257ENST00000627136 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
TCF4-257ENST00000627136 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
TCF4-257ENST00000627136 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
TCF4-257ENST00000627136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.34
TCF4-257ENST00000627136 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
TCF4-257ENST00000627136 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
TCF4-257ENST00000627136 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
TCF4-257ENST00000627136 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
TCF4-257ENST00000627136 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
TCF4-257ENST00000627136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
TCF4-257ENST00000627136 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
TCF4-257ENST00000627136 APLP2Q06481 763 aa12.44□□□□□ -0.42
TCF4-257ENST00000627136 CAPN15O75808 1086 aa12.41□□□□□ -0.42
TCF4-257ENST00000627136 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
TCF4-257ENST00000627136 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
TCF4-257ENST00000627136 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
TCF4-257ENST00000627136 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
TCF4-257ENST00000627136 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
TCF4-257ENST00000627136 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
TCF4-257ENST00000627136 DSG3P32926 999 aa12.23□□□□□ -0.45
TCF4-257ENST00000627136 ZBTB22O15209 634 aa12.18□□□□□ -0.46
TCF4-257ENST00000627136 ABCB7O75027 752 aa12.11□□□□□ -0.47
TCF4-257ENST00000627136 ABCC9O60706 1549 aa12□□□□□ -0.49
TCF4-257ENST00000627136 ATXN8OSP0DMR3 200 aa11.99□□□□□ -0.49
TCF4-257ENST00000627136 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
TCF4-257ENST00000627136 POLA2Q14181 598 aa11.98□□□□□ -0.49
TCF4-257ENST00000627136 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
TCF4-257ENST00000627136 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
TCF4-257ENST00000627136 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
TCF4-257ENST00000627136 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
TCF4-257ENST00000627136 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
TCF4-257ENST00000627136 FBLN2P98095 1184 aa11.62□□□□□ -0.55
TCF4-257ENST00000627136 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
TCF4-257ENST00000627136 AKT1S1Q96B36 256 aa11.49□□□□□ -0.57
TCF4-257ENST00000627136 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
TCF4-257ENST00000627136 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
TCF4-257ENST00000627136 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
TCF4-257ENST00000627136 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
TCF4-257ENST00000627136 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
TCF4-257ENST00000627136 POTEHQ6S545 545 aa11.35□□□□□ -0.59
TCF4-257ENST00000627136 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
TCF4-257ENST00000627136 RB1CC1Q8TDY2 1594 aa11.34□□□□□ -0.59
TCF4-257ENST00000627136 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
TCF4-257ENST00000627136 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
TCF4-257ENST00000627136 NACADO15069 1562 aa11.23□□□□□ -0.61
TCF4-257ENST00000627136 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
TCF4-257ENST00000627136 UNC13AQ9UPW8 1703 aa11.2□□□□□ -0.62
TCF4-257ENST00000627136 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
TCF4-257ENST00000627136 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
TCF4-257ENST00000627136 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
TCF4-257ENST00000627136 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
TCF4-257ENST00000627136 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
TCF4-257ENST00000627136 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
TCF4-257ENST00000627136 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
TCF4-257ENST00000627136 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
TCF4-257ENST00000627136 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
TCF4-257ENST00000627136 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
TCF4-257ENST00000627136 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
TCF4-257ENST00000627136 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.65
TCF4-257ENST00000627136 HAX1O00165 279 aa10.88□□□□□ -0.67
TCF4-257ENST00000627136 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
TCF4-257ENST00000627136 CC2D2AQ9P2K1 1620 aa10.85□□□□□ -0.67
TCF4-257ENST00000627136 ZCCHC6Q5VYS8 1495 aaKnown RBP10.85□□□□□ -0.67
TCF4-257ENST00000627136 PROM2Q8N271 834 aa10.82□□□□□ -0.68
TCF4-257ENST00000627136 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
TCF4-257ENST00000627136 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
TCF4-257ENST00000627136 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
TCF4-257ENST00000627136 SHROOM4Q9ULL8 1493 aa10.81□□□□□ -0.68
TCF4-257ENST00000627136 FKBP8Q14318 412 aa10.8□□□□□ -0.68
TCF4-257ENST00000627136 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.68
TCF4-257ENST00000627136 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
TCF4-257ENST00000627136 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
TCF4-257ENST00000627136 CREBZFQ9NS37 354 aa10.73□□□□□ -0.69
TCF4-257ENST00000627136 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
TCF4-257ENST00000627136 EVX2Q03828 476 aa10.66□□□□□ -0.7
TCF4-257ENST00000627136 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
TCF4-257ENST00000627136 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
TCF4-257ENST00000627136 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms