RNA–Protein interactions for RNA: ENST00000625049.1

MTHFSD-219, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

Gene MTHFSD, Length 3,623 nt, Biotype TEC, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-219ENST00000625049 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
MTHFSD-219ENST00000625049 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
MTHFSD-219ENST00000625049 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
MTHFSD-219ENST00000625049 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.75
MTHFSD-219ENST00000625049 EHMT2Q96KQ7 1210 aa18.66■□□□□ 0.58
MTHFSD-219ENST00000625049 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
MTHFSD-219ENST00000625049 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
MTHFSD-219ENST00000625049 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
MTHFSD-219ENST00000625049 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
MTHFSD-219ENST00000625049 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
MTHFSD-219ENST00000625049 ABCC9O60706 1549 aa18.28■□□□□ 0.52
MTHFSD-219ENST00000625049 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
MTHFSD-219ENST00000625049 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
MTHFSD-219ENST00000625049 SCRIBQ14160 1630 aa17.97■□□□□ 0.47
MTHFSD-219ENST00000625049 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
MTHFSD-219ENST00000625049 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
MTHFSD-219ENST00000625049 MYO15BQ96JP2 1530 aa17.84■□□□□ 0.45
MTHFSD-219ENST00000625049 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
MTHFSD-219ENST00000625049 HRCP23327 699 aa17.76■□□□□ 0.43
MTHFSD-219ENST00000625049 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
MTHFSD-219ENST00000625049 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
MTHFSD-219ENST00000625049 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
MTHFSD-219ENST00000625049 UBTFP17480 764 aaKnown RBP17.66■□□□□ 0.42
MTHFSD-219ENST00000625049 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
MTHFSD-219ENST00000625049 APLP2Q06481 763 aa17.49■□□□□ 0.39
MTHFSD-219ENST00000625049 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
MTHFSD-219ENST00000625049 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
MTHFSD-219ENST00000625049 NACADO15069 1562 aa17.41■□□□□ 0.38
MTHFSD-219ENST00000625049 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
MTHFSD-219ENST00000625049 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.37
MTHFSD-219ENST00000625049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
MTHFSD-219ENST00000625049 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.36
MTHFSD-219ENST00000625049 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
MTHFSD-219ENST00000625049 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
MTHFSD-219ENST00000625049 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
MTHFSD-219ENST00000625049 WIZO95785 1651 aa17.13■□□□□ 0.33
MTHFSD-219ENST00000625049 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
MTHFSD-219ENST00000625049 ITGAEP38570 1179 aa17.02■□□□□ 0.32
MTHFSD-219ENST00000625049 ABCC8Q09428 1581 aa16.96■□□□□ 0.3
MTHFSD-219ENST00000625049 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
MTHFSD-219ENST00000625049 SOGA1O94964 1423 aa16.89■□□□□ 0.29
MTHFSD-219ENST00000625049 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
MTHFSD-219ENST00000625049 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
MTHFSD-219ENST00000625049 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
MTHFSD-219ENST00000625049 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
MTHFSD-219ENST00000625049 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
MTHFSD-219ENST00000625049 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
MTHFSD-219ENST00000625049 TOP2AP11388 1531 aaKnown RBP16.77■□□□□ 0.28
MTHFSD-219ENST00000625049 CENPBP07199 599 aaPredicted RBP16.77■□□□□ 0.27
MTHFSD-219ENST00000625049 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
MTHFSD-219ENST00000625049 RUSC2Q8N2Y8 1516 aa16.69■□□□□ 0.26
MTHFSD-219ENST00000625049 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
MTHFSD-219ENST00000625049 CLIP1P30622 1438 aa16.69■□□□□ 0.26
MTHFSD-219ENST00000625049 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
MTHFSD-219ENST00000625049 EEA1Q15075 1411 aa16.67■□□□□ 0.26
MTHFSD-219ENST00000625049 FAM50AQ14320 339 aaKnown RBP16.65■□□□□ 0.26
MTHFSD-219ENST00000625049 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
MTHFSD-219ENST00000625049 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
MTHFSD-219ENST00000625049 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
MTHFSD-219ENST00000625049 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
MTHFSD-219ENST00000625049 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
MTHFSD-219ENST00000625049 ARID3CA6NKF2 412 aa16.49■□□□□ 0.23
MTHFSD-219ENST00000625049 KIF27Q86VH2 1401 aa16.44■□□□□ 0.22
MTHFSD-219ENST00000625049 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
MTHFSD-219ENST00000625049 RAPGEF2Q9Y4G8 1499 aa16.41■□□□□ 0.22
MTHFSD-219ENST00000625049 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
MTHFSD-219ENST00000625049 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
MTHFSD-219ENST00000625049 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
MTHFSD-219ENST00000625049 FBLN2P98095 1184 aa16.36■□□□□ 0.21
MTHFSD-219ENST00000625049 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
MTHFSD-219ENST00000625049 CUX2O14529 1486 aa16.34■□□□□ 0.21
MTHFSD-219ENST00000625049 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.21
MTHFSD-219ENST00000625049 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
MTHFSD-219ENST00000625049 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
MTHFSD-219ENST00000625049 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
MTHFSD-219ENST00000625049 MIER1Q8N108 512 aa16.27■□□□□ 0.2
MTHFSD-219ENST00000625049 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
MTHFSD-219ENST00000625049 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
MTHFSD-219ENST00000625049 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
MTHFSD-219ENST00000625049 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
MTHFSD-219ENST00000625049 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
MTHFSD-219ENST00000625049 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
MTHFSD-219ENST00000625049 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
MTHFSD-219ENST00000625049 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
MTHFSD-219ENST00000625049 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
MTHFSD-219ENST00000625049 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
MTHFSD-219ENST00000625049 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
MTHFSD-219ENST00000625049 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
MTHFSD-219ENST00000625049 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
MTHFSD-219ENST00000625049 SIN3AQ96ST3 1273 aa16.1■□□□□ 0.17
MTHFSD-219ENST00000625049 ZNF777Q9ULD5 760 aaPredicted RBP16.1■□□□□ 0.17
MTHFSD-219ENST00000625049 KIF21BO75037 1637 aa16.07■□□□□ 0.16
MTHFSD-219ENST00000625049 NEFLP07196 543 aa16.07■□□□□ 0.16
MTHFSD-219ENST00000625049 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
MTHFSD-219ENST00000625049 IGF1RP08069 1367 aa16.06■□□□□ 0.16
MTHFSD-219ENST00000625049 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
MTHFSD-219ENST00000625049 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
MTHFSD-219ENST00000625049 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
MTHFSD-219ENST00000625049 CFTRP13569 1480 aa16.04■□□□□ 0.16
MTHFSD-219ENST00000625049 CUX1P39880 1505 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms