RNA–Protein interactions for RNA: ENST00000617806.4

BECN1-222, Transcript of beclin 1, humanhuman

TSL 5

Gene BECN1, Length 4,865 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-222ENST00000617806 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
BECN1-222ENST00000617806 NISCHQ9Y2I1 1504 aa18.75■□□□□ 0.59
BECN1-222ENST00000617806 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
BECN1-222ENST00000617806 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
BECN1-222ENST00000617806 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
BECN1-222ENST00000617806 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
BECN1-222ENST00000617806 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
BECN1-222ENST00000617806 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
BECN1-222ENST00000617806 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
BECN1-222ENST00000617806 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
BECN1-222ENST00000617806 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
BECN1-222ENST00000617806 HRCP23327 699 aa17.32■□□□□ 0.36
BECN1-222ENST00000617806 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
BECN1-222ENST00000617806 APLP2Q06481 763 aa17.21■□□□□ 0.35
BECN1-222ENST00000617806 TRIM41Q8WV44 630 aa17.16■□□□□ 0.34
BECN1-222ENST00000617806 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
BECN1-222ENST00000617806 TRIM26Q12899 539 aaPredicted RBP17.06■□□□□ 0.32
BECN1-222ENST00000617806 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
BECN1-222ENST00000617806 MYT1Q01538 1121 aa17.01■□□□□ 0.31
BECN1-222ENST00000617806 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
BECN1-222ENST00000617806 LOC105371045A0A1W2PR82 267 aa16.94■□□□□ 0.3
BECN1-222ENST00000617806 RANGAP1P46060 587 aaPredicted RBP16.9■□□□□ 0.3
BECN1-222ENST00000617806 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
BECN1-222ENST00000617806 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
BECN1-222ENST00000617806 NEFLP07196 543 aa16.65■□□□□ 0.26
BECN1-222ENST00000617806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
BECN1-222ENST00000617806 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
BECN1-222ENST00000617806 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
BECN1-222ENST00000617806 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
BECN1-222ENST00000617806 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
BECN1-222ENST00000617806 ITGAEP38570 1179 aa16.34■□□□□ 0.21
BECN1-222ENST00000617806 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
BECN1-222ENST00000617806 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
BECN1-222ENST00000617806 BCANQ96GW7 911 aa16.11■□□□□ 0.17
BECN1-222ENST00000617806 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
BECN1-222ENST00000617806 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
BECN1-222ENST00000617806 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
BECN1-222ENST00000617806 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
BECN1-222ENST00000617806 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
BECN1-222ENST00000617806 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
BECN1-222ENST00000617806 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
BECN1-222ENST00000617806 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
BECN1-222ENST00000617806 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
BECN1-222ENST00000617806 ANP32CO43423 234 aa15.81■□□□□ 0.12
BECN1-222ENST00000617806 CDK11AQ9UQ88 783 aaPredicted RBP15.81■□□□□ 0.12
BECN1-222ENST00000617806 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
BECN1-222ENST00000617806 FKBP8Q14318 412 aa15.69■□□□□ 0.1
BECN1-222ENST00000617806 TRIM52Q96A61 297 aa15.68■□□□□ 0.1
BECN1-222ENST00000617806 MIER1Q8N108 512 aa15.66■□□□□ 0.1
BECN1-222ENST00000617806 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
BECN1-222ENST00000617806 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
BECN1-222ENST00000617806 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.09
BECN1-222ENST00000617806 ABCC9O60706 1549 aa15.56■□□□□ 0.08
BECN1-222ENST00000617806 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
BECN1-222ENST00000617806 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
BECN1-222ENST00000617806 ANP32AP39687 249 aaKnown RBP15.5■□□□□ 0.07
BECN1-222ENST00000617806 MYT1LQ9UL68 1186 aa15.5■□□□□ 0.07
BECN1-222ENST00000617806 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
BECN1-222ENST00000617806 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.07
BECN1-222ENST00000617806 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
BECN1-222ENST00000617806 NPM2Q86SE8 214 aaKnown RBP15.45■□□□□ 0.06
BECN1-222ENST00000617806 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
BECN1-222ENST00000617806 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
BECN1-222ENST00000617806 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
BECN1-222ENST00000617806 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
BECN1-222ENST00000617806 NBR1Q14596 966 aa15.37■□□□□ 0.05
BECN1-222ENST00000617806 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
BECN1-222ENST00000617806 IRX6P78412 446 aaPredicted RBP15.35■□□□□ 0.05
BECN1-222ENST00000617806 HIRIP3Q9BW71 556 aaPredicted RBP15.34■□□□□ 0.05
BECN1-222ENST00000617806 EIF5BO60841 1220 aaKnown RBP15.33■□□□□ 0.04
BECN1-222ENST00000617806 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
BECN1-222ENST00000617806 CEP162Q5TB80 1403 aa15.27■□□□□ 0.04
BECN1-222ENST00000617806 CCDC136Q96JN2 1154 aa15.26■□□□□ 0.03
BECN1-222ENST00000617806 ZBTB47Q9UFB7 747 aaPredicted RBP15.25■□□□□ 0.03
BECN1-222ENST00000617806 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
BECN1-222ENST00000617806 CLIP1P30622 1438 aa15.24■□□□□ 0.03
BECN1-222ENST00000617806 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
BECN1-222ENST00000617806 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
BECN1-222ENST00000617806 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
BECN1-222ENST00000617806 SALL2Q9Y467 1007 aaPredicted RBP15.21■□□□□ 0.03
BECN1-222ENST00000617806 MRS2Q9HD23 443 aa15.21■□□□□ 0.03
BECN1-222ENST00000617806 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
BECN1-222ENST00000617806 ZNF777Q9ULD5 760 aaPredicted RBP15.14■□□□□ 0.01
BECN1-222ENST00000617806 TMC1Q8TDI8 760 aa15.13■□□□□ 0.01
BECN1-222ENST00000617806 GOLGA3Q08378 1498 aa15.11■□□□□ 0.01
BECN1-222ENST00000617806 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
BECN1-222ENST00000617806 EEA1Q15075 1411 aa15.07■□□□□ 0
BECN1-222ENST00000617806 FBLN2P98095 1184 aa15.05■□□□□ 0
BECN1-222ENST00000617806 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
BECN1-222ENST00000617806 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
BECN1-222ENST00000617806 ARXQ96QS3 562 aa15.03■□□□□ -0
BECN1-222ENST00000617806 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
BECN1-222ENST00000617806 UPF2Q9HAU5 1272 aaKnown RBP15□□□□□ -0.01
BECN1-222ENST00000617806 RBM19Q9Y4C8 960 aaKnown RBP15□□□□□ -0.01
BECN1-222ENST00000617806 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
BECN1-222ENST00000617806 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
BECN1-222ENST00000617806 PPP4R2Q9NY27 417 aa14.96□□□□□ -0.01
BECN1-222ENST00000617806 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.01
BECN1-222ENST00000617806 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.02
BECN1-222ENST00000617806 GLIPR1L2Q4G1C9 344 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms