RNA–Protein interactions for RNA: ENST00000616646.4

DDX52-212, Transcript of DExD-box helicase 52, humanhuman

TSL 5

Gene DDX52, Length 2,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-212ENST00000616646 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
DDX52-212ENST00000616646 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
DDX52-212ENST00000616646 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
DDX52-212ENST00000616646 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
DDX52-212ENST00000616646 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
DDX52-212ENST00000616646 EHMT2Q96KQ7 1210 aa14.44□□□□□ -0.1
DDX52-212ENST00000616646 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
DDX52-212ENST00000616646 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
DDX52-212ENST00000616646 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
DDX52-212ENST00000616646 HRCP23327 699 aa14.06□□□□□ -0.16
DDX52-212ENST00000616646 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
DDX52-212ENST00000616646 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
DDX52-212ENST00000616646 MYO15BQ96JP2 1530 aa13.92□□□□□ -0.18
DDX52-212ENST00000616646 LOC105371045A0A1W2PR82 267 aa13.83□□□□□ -0.2
DDX52-212ENST00000616646 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
DDX52-212ENST00000616646 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
DDX52-212ENST00000616646 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
DDX52-212ENST00000616646 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
DDX52-212ENST00000616646 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
DDX52-212ENST00000616646 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
DDX52-212ENST00000616646 KCNA4P22459 653 aa13.3□□□□□ -0.28
DDX52-212ENST00000616646 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
DDX52-212ENST00000616646 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
DDX52-212ENST00000616646 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
DDX52-212ENST00000616646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
DDX52-212ENST00000616646 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
DDX52-212ENST00000616646 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
DDX52-212ENST00000616646 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
DDX52-212ENST00000616646 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
DDX52-212ENST00000616646 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
DDX52-212ENST00000616646 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
DDX52-212ENST00000616646 ZEB1P37275 1124 aaPredicted RBP13.05□□□□□ -0.32
DDX52-212ENST00000616646 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
DDX52-212ENST00000616646 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.32
DDX52-212ENST00000616646 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
DDX52-212ENST00000616646 YTHDC1Q96MU7 727 aaKnown RBP12.99□□□□□ -0.33
DDX52-212ENST00000616646 CCDC180Q9P1Z9 1646 aa12.98□□□□□ -0.33
DDX52-212ENST00000616646 ACIN1Q9UKV3 1341 aaKnown RBP12.97□□□□□ -0.33
DDX52-212ENST00000616646 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.35
DDX52-212ENST00000616646 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
DDX52-212ENST00000616646 CENPBP07199 599 aaPredicted RBP12.76□□□□□ -0.37
DDX52-212ENST00000616646 RB1CC1Q8TDY2 1594 aa12.72□□□□□ -0.37
DDX52-212ENST00000616646 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
DDX52-212ENST00000616646 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
DDX52-212ENST00000616646 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
DDX52-212ENST00000616646 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
DDX52-212ENST00000616646 MIER1Q8N108 512 aa12.66□□□□□ -0.38
DDX52-212ENST00000616646 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
DDX52-212ENST00000616646 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
DDX52-212ENST00000616646 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
DDX52-212ENST00000616646 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
DDX52-212ENST00000616646 ABCC9O60706 1549 aa12.58□□□□□ -0.4
DDX52-212ENST00000616646 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
DDX52-212ENST00000616646 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
DDX52-212ENST00000616646 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
DDX52-212ENST00000616646 SOGA1O94964 1423 aa12.43□□□□□ -0.42
DDX52-212ENST00000616646 ADRA2BP18089 450 aa12.42□□□□□ -0.42
DDX52-212ENST00000616646 ARXQ96QS3 562 aa12.42□□□□□ -0.42
DDX52-212ENST00000616646 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
DDX52-212ENST00000616646 TPRNQ4KMQ1 711 aa12.41□□□□□ -0.42
DDX52-212ENST00000616646 BCANQ96GW7 911 aa12.41□□□□□ -0.42
DDX52-212ENST00000616646 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
DDX52-212ENST00000616646 ABCC8Q09428 1581 aa12.41□□□□□ -0.42
DDX52-212ENST00000616646 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
DDX52-212ENST00000616646 WIZO95785 1651 aa12.37□□□□□ -0.43
DDX52-212ENST00000616646 MYT1Q01538 1121 aa12.36□□□□□ -0.43
DDX52-212ENST00000616646 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
DDX52-212ENST00000616646 ITGAEP38570 1179 aa12.32□□□□□ -0.44
DDX52-212ENST00000616646 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
DDX52-212ENST00000616646 ZBTB22O15209 634 aa12.29□□□□□ -0.44
DDX52-212ENST00000616646 APLP2Q06481 763 aa12.26□□□□□ -0.45
DDX52-212ENST00000616646 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
DDX52-212ENST00000616646 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
DDX52-212ENST00000616646 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
DDX52-212ENST00000616646 HIRIP3Q9BW71 556 aaPredicted RBP12.21□□□□□ -0.46
DDX52-212ENST00000616646 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
DDX52-212ENST00000616646 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
DDX52-212ENST00000616646 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
DDX52-212ENST00000616646 FKBP8Q14318 412 aa12.13□□□□□ -0.47
DDX52-212ENST00000616646 KANK4Q5T7N3 995 aaPredicted RBP12.13□□□□□ -0.47
DDX52-212ENST00000616646 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
DDX52-212ENST00000616646 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
DDX52-212ENST00000616646 CLIP1P30622 1438 aa12.11□□□□□ -0.47
DDX52-212ENST00000616646 ANP32EQ9BTT0 268 aa12.1□□□□□ -0.47
DDX52-212ENST00000616646 TRIM52Q96A61 297 aa12.1□□□□□ -0.47
DDX52-212ENST00000616646 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
DDX52-212ENST00000616646 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
DDX52-212ENST00000616646 PODXL2Q9NZ53 605 aa12.09□□□□□ -0.47
DDX52-212ENST00000616646 GOLGA3Q08378 1498 aa12.06□□□□□ -0.48
DDX52-212ENST00000616646 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
DDX52-212ENST00000616646 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
DDX52-212ENST00000616646 EIF4G1Q04637 1599 aaKnown RBP12.04□□□□□ -0.48
DDX52-212ENST00000616646 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
DDX52-212ENST00000616646 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
DDX52-212ENST00000616646 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
DDX52-212ENST00000616646 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
DDX52-212ENST00000616646 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
DDX52-212ENST00000616646 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
DDX52-212ENST00000616646 VPS8Q8N3P4 1428 aa11.97□□□□□ -0.49
DDX52-212ENST00000616646 RBM19Q9Y4C8 960 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms