RNA–Protein interactions for RNA: ENST00000613994.1

TULP4-205, Transcript of tubby like protein 4, humanhuman

TSL 3

Gene TULP4, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-205ENST00000613994 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
TULP4-205ENST00000613994 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
TULP4-205ENST00000613994 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
TULP4-205ENST00000613994 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
TULP4-205ENST00000613994 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
TULP4-205ENST00000613994 FOXD1Q16676 465 aa16.96■□□□□ 0.31
TULP4-205ENST00000613994 ADRA2BP18089 450 aa16.92■□□□□ 0.3
TULP4-205ENST00000613994 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
TULP4-205ENST00000613994 KCNA4P22459 653 aa16.39■□□□□ 0.21
TULP4-205ENST00000613994 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
TULP4-205ENST00000613994 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
TULP4-205ENST00000613994 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
TULP4-205ENST00000613994 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
TULP4-205ENST00000613994 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
TULP4-205ENST00000613994 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
TULP4-205ENST00000613994 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
TULP4-205ENST00000613994 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
TULP4-205ENST00000613994 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
TULP4-205ENST00000613994 MSH5O43196 834 aa15.38■□□□□ 0.05
TULP4-205ENST00000613994 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
TULP4-205ENST00000613994 ZBTB22O15209 634 aa15.09■□□□□ 0.01
TULP4-205ENST00000613994 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
TULP4-205ENST00000613994 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
TULP4-205ENST00000613994 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
TULP4-205ENST00000613994 NISCHQ9Y2I1 1504 aa14.8□□□□□ -0.04
TULP4-205ENST00000613994 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
TULP4-205ENST00000613994 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
TULP4-205ENST00000613994 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
TULP4-205ENST00000613994 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
TULP4-205ENST00000613994 ATXN8OSP0DMR3 200 aa14.29□□□□□ -0.12
TULP4-205ENST00000613994 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
TULP4-205ENST00000613994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
TULP4-205ENST00000613994 FKBP8Q14318 412 aa14.03□□□□□ -0.16
TULP4-205ENST00000613994 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
TULP4-205ENST00000613994 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
TULP4-205ENST00000613994 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
TULP4-205ENST00000613994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
TULP4-205ENST00000613994 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
TULP4-205ENST00000613994 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
TULP4-205ENST00000613994 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
TULP4-205ENST00000613994 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
TULP4-205ENST00000613994 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
TULP4-205ENST00000613994 APLP2Q06481 763 aa13.62□□□□□ -0.23
TULP4-205ENST00000613994 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
TULP4-205ENST00000613994 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
TULP4-205ENST00000613994 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
TULP4-205ENST00000613994 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
TULP4-205ENST00000613994 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
TULP4-205ENST00000613994 ABCC9O60706 1549 aa13.3□□□□□ -0.28
TULP4-205ENST00000613994 FBLN2P98095 1184 aa13.3□□□□□ -0.28
TULP4-205ENST00000613994 POLA2Q14181 598 aa13.25□□□□□ -0.29
TULP4-205ENST00000613994 CAPN15O75808 1086 aa13.23□□□□□ -0.29
TULP4-205ENST00000613994 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
TULP4-205ENST00000613994 PROM2Q8N271 834 aa13.21□□□□□ -0.29
TULP4-205ENST00000613994 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
TULP4-205ENST00000613994 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
TULP4-205ENST00000613994 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
TULP4-205ENST00000613994 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
TULP4-205ENST00000613994 ABCB7O75027 752 aa13.05□□□□□ -0.32
TULP4-205ENST00000613994 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
TULP4-205ENST00000613994 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
TULP4-205ENST00000613994 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
TULP4-205ENST00000613994 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
TULP4-205ENST00000613994 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
TULP4-205ENST00000613994 DSG3P32926 999 aa12.83□□□□□ -0.36
TULP4-205ENST00000613994 PKD2Q13563 968 aa12.82□□□□□ -0.36
TULP4-205ENST00000613994 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
TULP4-205ENST00000613994 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
TULP4-205ENST00000613994 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
TULP4-205ENST00000613994 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
TULP4-205ENST00000613994 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
TULP4-205ENST00000613994 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
TULP4-205ENST00000613994 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
TULP4-205ENST00000613994 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
TULP4-205ENST00000613994 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
TULP4-205ENST00000613994 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
TULP4-205ENST00000613994 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
TULP4-205ENST00000613994 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
TULP4-205ENST00000613994 MIER1Q8N108 512 aa12.62□□□□□ -0.39
TULP4-205ENST00000613994 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
TULP4-205ENST00000613994 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
TULP4-205ENST00000613994 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
TULP4-205ENST00000613994 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
TULP4-205ENST00000613994 NACADO15069 1562 aa12.51□□□□□ -0.41
TULP4-205ENST00000613994 RGL2O15211 777 aa12.49□□□□□ -0.41
TULP4-205ENST00000613994 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
TULP4-205ENST00000613994 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
TULP4-205ENST00000613994 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
TULP4-205ENST00000613994 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
TULP4-205ENST00000613994 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
TULP4-205ENST00000613994 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
TULP4-205ENST00000613994 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
TULP4-205ENST00000613994 BCANQ96GW7 911 aa12.4□□□□□ -0.42
TULP4-205ENST00000613994 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
TULP4-205ENST00000613994 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
TULP4-205ENST00000613994 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
TULP4-205ENST00000613994 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
TULP4-205ENST00000613994 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
TULP4-205ENST00000613994 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.45
TULP4-205ENST00000613994 GSE1Q14687 1217 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms