RNA–Protein interactions for RNA: ENST00000598473.1

CD33-205, Transcript of CD33 molecule, humanhuman

TSL 2

Gene CD33, Length 4,728 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD33-205ENST00000598473 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
CD33-205ENST00000598473 NISCHQ9Y2I1 1504 aa14.32□□□□□ -0.12
CD33-205ENST00000598473 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
CD33-205ENST00000598473 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
CD33-205ENST00000598473 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
CD33-205ENST00000598473 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
CD33-205ENST00000598473 APLP2Q06481 763 aa12.7□□□□□ -0.38
CD33-205ENST00000598473 ABCC9O60706 1549 aa12.64□□□□□ -0.39
CD33-205ENST00000598473 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
CD33-205ENST00000598473 RANGAP1P46060 587 aaPredicted RBP12.51□□□□□ -0.41
CD33-205ENST00000598473 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
CD33-205ENST00000598473 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
CD33-205ENST00000598473 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
CD33-205ENST00000598473 TTBK1Q5TCY1 1321 aaPredicted RBP12.38□□□□□ -0.43
CD33-205ENST00000598473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
CD33-205ENST00000598473 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
CD33-205ENST00000598473 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
CD33-205ENST00000598473 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
CD33-205ENST00000598473 FBLN2P98095 1184 aa11.95□□□□□ -0.5
CD33-205ENST00000598473 CCER1Q8TC90 406 aaPredicted RBP11.93□□□□□ -0.5
CD33-205ENST00000598473 SCRIBQ14160 1630 aa11.92□□□□□ -0.5
CD33-205ENST00000598473 PPARGC1BQ86YN6 1023 aaKnown RBP11.91□□□□□ -0.5
CD33-205ENST00000598473 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
CD33-205ENST00000598473 CHIC1Q5VXU3 224 aa11.89□□□□□ -0.51
CD33-205ENST00000598473 ITGAEP38570 1179 aa11.87□□□□□ -0.51
CD33-205ENST00000598473 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
CD33-205ENST00000598473 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
CD33-205ENST00000598473 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
CD33-205ENST00000598473 ZEB1P37275 1124 aaPredicted RBP11.78□□□□□ -0.52
CD33-205ENST00000598473 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
CD33-205ENST00000598473 FAM50AQ14320 339 aaKnown RBP11.65□□□□□ -0.54
CD33-205ENST00000598473 NACADO15069 1562 aa11.65□□□□□ -0.54
CD33-205ENST00000598473 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
CD33-205ENST00000598473 POLR3GLQ9BT43 218 aa11.62□□□□□ -0.55
CD33-205ENST00000598473 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
CD33-205ENST00000598473 ARID3CA6NKF2 412 aa11.6□□□□□ -0.55
CD33-205ENST00000598473 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
CD33-205ENST00000598473 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
CD33-205ENST00000598473 TRIM52Q96A61 297 aa11.57□□□□□ -0.56
CD33-205ENST00000598473 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
CD33-205ENST00000598473 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.56
CD33-205ENST00000598473 CHMP7Q8WUX9 453 aaPredicted RBP11.51□□□□□ -0.57
CD33-205ENST00000598473 CENPBP07199 599 aaPredicted RBP11.49□□□□□ -0.57
CD33-205ENST00000598473 ZNF777Q9ULD5 760 aaPredicted RBP11.48□□□□□ -0.57
CD33-205ENST00000598473 ESF1Q9H501 851 aaKnown RBP11.47□□□□□ -0.57
CD33-205ENST00000598473 BAZ1BQ9UIG0 1483 aaKnown RBP11.45□□□□□ -0.58
CD33-205ENST00000598473 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
CD33-205ENST00000598473 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
CD33-205ENST00000598473 BCANQ96GW7 911 aa11.43□□□□□ -0.58
CD33-205ENST00000598473 NEFLP07196 543 aa11.4□□□□□ -0.58
CD33-205ENST00000598473 ZNF326Q5BKZ1 582 aaKnown RBP11.37□□□□□ -0.59
CD33-205ENST00000598473 NEUROD1Q13562 356 aa11.36□□□□□ -0.59
CD33-205ENST00000598473 YTHDC1Q96MU7 727 aaKnown RBP11.36□□□□□ -0.59
CD33-205ENST00000598473 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
CD33-205ENST00000598473 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
CD33-205ENST00000598473 DCAF1Q9Y4B6 1507 aa11.33□□□□□ -0.6
CD33-205ENST00000598473 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
CD33-205ENST00000598473 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
CD33-205ENST00000598473 CHGAP10645 457 aaKnown RBP11.27□□□□□ -0.61
CD33-205ENST00000598473 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
CD33-205ENST00000598473 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
CD33-205ENST00000598473 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
CD33-205ENST00000598473 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
CD33-205ENST00000598473 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
CD33-205ENST00000598473 HRCP23327 699 aa11.24□□□□□ -0.61
CD33-205ENST00000598473 PLEKHD1A6NEE1 506 aa11.22□□□□□ -0.61
CD33-205ENST00000598473 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
CD33-205ENST00000598473 KIF27Q86VH2 1401 aa11.2□□□□□ -0.62
CD33-205ENST00000598473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.62
CD33-205ENST00000598473 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
CD33-205ENST00000598473 PDS5BQ9NTI5 1447 aa11.18□□□□□ -0.62
CD33-205ENST00000598473 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
CD33-205ENST00000598473 EEA1Q15075 1411 aa11.15□□□□□ -0.62
CD33-205ENST00000598473 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
CD33-205ENST00000598473 SMARCA2P51531 1590 aa11.15□□□□□ -0.62
CD33-205ENST00000598473 CLIP1P30622 1438 aa11.13□□□□□ -0.63
CD33-205ENST00000598473 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
CD33-205ENST00000598473 NEFMP07197 916 aa11.11□□□□□ -0.63
CD33-205ENST00000598473 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
CD33-205ENST00000598473 MYO15BQ96JP2 1530 aa11.1□□□□□ -0.63
CD33-205ENST00000598473 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
CD33-205ENST00000598473 CUX2O14529 1486 aa11.07□□□□□ -0.64
CD33-205ENST00000598473 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
CD33-205ENST00000598473 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
CD33-205ENST00000598473 TONSLQ96HA7 1378 aa11.05□□□□□ -0.64
CD33-205ENST00000598473 ANP32CO43423 234 aa11.05□□□□□ -0.64
CD33-205ENST00000598473 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
CD33-205ENST00000598473 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
CD33-205ENST00000598473 DIEXFQ68CQ4 756 aaKnown RBP11.03□□□□□ -0.64
CD33-205ENST00000598473 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
CD33-205ENST00000598473 TDRD9Q8NDG6 1382 aaKnown RBP11.01□□□□□ -0.65
CD33-205ENST00000598473 SOGA1O94964 1423 aa11.01□□□□□ -0.65
CD33-205ENST00000598473 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
CD33-205ENST00000598473 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
CD33-205ENST00000598473 RRP7BPQ9NSQ0 103 aa11□□□□□ -0.65
CD33-205ENST00000598473 EIF4G1Q04637 1599 aaKnown RBP11□□□□□ -0.65
CD33-205ENST00000598473 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
CD33-205ENST00000598473 C14orf37Q86TY3 774 aa10.99□□□□□ -0.65
CD33-205ENST00000598473 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
CD33-205ENST00000598473 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms