RNA–Protein interactions for RNA: ENST00000596701.1

CPT1C-212, Transcript of carnitine palmitoyltransferase 1C, humanhuman

TSL 2

Gene CPT1C, Length 2,950 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-212ENST00000596701 PELP1Q8IZL8 1130 aaKnown RBP19.32■□□□□ 0.68
CPT1C-212ENST00000596701 HRCP23327 699 aa19.21■□□□□ 0.67
CPT1C-212ENST00000596701 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
CPT1C-212ENST00000596701 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
CPT1C-212ENST00000596701 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
CPT1C-212ENST00000596701 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
CPT1C-212ENST00000596701 MYT1Q01538 1121 aa18.66■□□□□ 0.58
CPT1C-212ENST00000596701 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.49
CPT1C-212ENST00000596701 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
CPT1C-212ENST00000596701 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
CPT1C-212ENST00000596701 GTF3C3Q9Y5Q9 886 aa17.91■□□□□ 0.46
CPT1C-212ENST00000596701 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
CPT1C-212ENST00000596701 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
CPT1C-212ENST00000596701 BCL11AQ9H165 835 aa17.77■□□□□ 0.44
CPT1C-212ENST00000596701 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
CPT1C-212ENST00000596701 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
CPT1C-212ENST00000596701 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
CPT1C-212ENST00000596701 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
CPT1C-212ENST00000596701 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
CPT1C-212ENST00000596701 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
CPT1C-212ENST00000596701 PRKCSHP14314 528 aaPredicted RBP17.57■□□□□ 0.4
CPT1C-212ENST00000596701 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
CPT1C-212ENST00000596701 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
CPT1C-212ENST00000596701 CCDC180Q9P1Z9 1646 aa17.42■□□□□ 0.38
CPT1C-212ENST00000596701 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
CPT1C-212ENST00000596701 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
CPT1C-212ENST00000596701 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
CPT1C-212ENST00000596701 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
CPT1C-212ENST00000596701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
CPT1C-212ENST00000596701 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
CPT1C-212ENST00000596701 DCAF8L2P0C7V8 631 aa17.04■□□□□ 0.32
CPT1C-212ENST00000596701 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
CPT1C-212ENST00000596701 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
CPT1C-212ENST00000596701 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.29
CPT1C-212ENST00000596701 MIER1Q8N108 512 aa16.83■□□□□ 0.29
CPT1C-212ENST00000596701 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
CPT1C-212ENST00000596701 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
CPT1C-212ENST00000596701 APLP2Q06481 763 aa16.74■□□□□ 0.27
CPT1C-212ENST00000596701 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
CPT1C-212ENST00000596701 ANO8Q9HCE9 1232 aaPredicted RBP16.69■□□□□ 0.26
CPT1C-212ENST00000596701 BCANQ96GW7 911 aa16.62■□□□□ 0.25
CPT1C-212ENST00000596701 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
CPT1C-212ENST00000596701 RBM19Q9Y4C8 960 aaKnown RBP16.46■□□□□ 0.23
CPT1C-212ENST00000596701 MSH5O43196 834 aa16.43■□□□□ 0.22
CPT1C-212ENST00000596701 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
CPT1C-212ENST00000596701 CLSPNQ9HAW4 1339 aa16.38■□□□□ 0.21
CPT1C-212ENST00000596701 DEKP35659 375 aaKnown RBP16.32■□□□□ 0.2
CPT1C-212ENST00000596701 ITGAEP38570 1179 aa16.32■□□□□ 0.2
CPT1C-212ENST00000596701 FKBP8Q14318 412 aa16.3■□□□□ 0.2
CPT1C-212ENST00000596701 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
CPT1C-212ENST00000596701 RTN4Q9NQC3 1192 aaKnown RBP16.19■□□□□ 0.18
CPT1C-212ENST00000596701 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
CPT1C-212ENST00000596701 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
CPT1C-212ENST00000596701 NBR1Q14596 966 aa16.11■□□□□ 0.17
CPT1C-212ENST00000596701 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
CPT1C-212ENST00000596701 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
CPT1C-212ENST00000596701 IL27Q8NEV9 243 aa16.07■□□□□ 0.16
CPT1C-212ENST00000596701 NEFLP07196 543 aa16.04■□□□□ 0.16
CPT1C-212ENST00000596701 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
CPT1C-212ENST00000596701 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
CPT1C-212ENST00000596701 ERICH6BQ5W0A0 696 aa15.95■□□□□ 0.14
CPT1C-212ENST00000596701 EIF5BO60841 1220 aaKnown RBP15.93■□□□□ 0.14
CPT1C-212ENST00000596701 IRX6P78412 446 aaPredicted RBP15.9■□□□□ 0.14
CPT1C-212ENST00000596701 TRIM52Q96A61 297 aa15.88■□□□□ 0.13
CPT1C-212ENST00000596701 CDK11AQ9UQ88 783 aaPredicted RBP15.88■□□□□ 0.13
CPT1C-212ENST00000596701 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
CPT1C-212ENST00000596701 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
CPT1C-212ENST00000596701 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
CPT1C-212ENST00000596701 NOP58Q9Y2X3 529 aaKnown RBP15.78■□□□□ 0.12
CPT1C-212ENST00000596701 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
CPT1C-212ENST00000596701 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
CPT1C-212ENST00000596701 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
CPT1C-212ENST00000596701 DDX10Q13206 875 aaKnown RBP15.67■□□□□ 0.1
CPT1C-212ENST00000596701 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
CPT1C-212ENST00000596701 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
CPT1C-212ENST00000596701 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
CPT1C-212ENST00000596701 PODXL2Q9NZ53 605 aa15.62■□□□□ 0.09
CPT1C-212ENST00000596701 BRPF3Q9ULD4 1205 aa15.6■□□□□ 0.09
CPT1C-212ENST00000596701 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.08
CPT1C-212ENST00000596701 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
CPT1C-212ENST00000596701 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
CPT1C-212ENST00000596701 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
CPT1C-212ENST00000596701 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
CPT1C-212ENST00000596701 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.07
CPT1C-212ENST00000596701 DHX57Q6P158 1386 aaKnown RBP15.51■□□□□ 0.07
CPT1C-212ENST00000596701 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
CPT1C-212ENST00000596701 VSIG10Q8N0Z9 540 aa15.49■□□□□ 0.07
CPT1C-212ENST00000596701 ZMYND15Q9H091 742 aa15.48■□□□□ 0.07
CPT1C-212ENST00000596701 HNRNPUQ00839 825 aaKnown RBP eCLIP15.47■□□□□ 0.07
CPT1C-212ENST00000596701 NEFMP07197 916 aa15.47■□□□□ 0.07
CPT1C-212ENST00000596701 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
CPT1C-212ENST00000596701 IPO9Q96P70 1041 aaKnown RBP15.46■□□□□ 0.07
CPT1C-212ENST00000596701 PPP4R2Q9NY27 417 aa15.45■□□□□ 0.06
CPT1C-212ENST00000596701 NPM2Q86SE8 214 aaKnown RBP15.42■□□□□ 0.06
CPT1C-212ENST00000596701 ANP32CO43423 234 aa15.42■□□□□ 0.06
CPT1C-212ENST00000596701 ABCC9O60706 1549 aa15.41■□□□□ 0.06
CPT1C-212ENST00000596701 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
CPT1C-212ENST00000596701 C11orf95C9JLR9 678 aaPredicted RBP15.37■□□□□ 0.05
CPT1C-212ENST00000596701 SIN3AQ96ST3 1273 aa15.37■□□□□ 0.05
CPT1C-212ENST00000596701 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms