RNA–Protein interactions for RNA: ENST00000593380.1

C19orf44-202, Transcript of chromosome 19 open reading frame 44, humanhuman

TSL 1 (best)

Gene C19orf44, Length 3,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf44-202ENST00000593380 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
C19orf44-202ENST00000593380 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
C19orf44-202ENST00000593380 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
C19orf44-202ENST00000593380 HRCP23327 699 aa22.36■■□□□ 1.17
C19orf44-202ENST00000593380 PPARGC1BQ86YN6 1023 aaKnown RBP22.21■■□□□ 1.15
C19orf44-202ENST00000593380 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
C19orf44-202ENST00000593380 PCGF6Q9BYE7 350 aa22.21■■□□□ 1.15
C19orf44-202ENST00000593380 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
C19orf44-202ENST00000593380 PELP1Q8IZL8 1130 aaKnown RBP21.72■■□□□ 1.07
C19orf44-202ENST00000593380 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
C19orf44-202ENST00000593380 LOC105371045A0A1W2PR82 267 aa21.45■■□□□ 1.02
C19orf44-202ENST00000593380 MYT1Q01538 1121 aa21.41■■□□□ 1.02
C19orf44-202ENST00000593380 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
C19orf44-202ENST00000593380 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
C19orf44-202ENST00000593380 TRIM26Q12899 539 aaPredicted RBP21.21■□□□□ 0.99
C19orf44-202ENST00000593380 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
C19orf44-202ENST00000593380 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.97
C19orf44-202ENST00000593380 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
C19orf44-202ENST00000593380 PRKCSHP14314 528 aaPredicted RBP20.95■□□□□ 0.94
C19orf44-202ENST00000593380 ZEB1P37275 1124 aaPredicted RBP20.94■□□□□ 0.94
C19orf44-202ENST00000593380 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
C19orf44-202ENST00000593380 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
C19orf44-202ENST00000593380 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
C19orf44-202ENST00000593380 GTF3C3Q9Y5Q9 886 aa20.68■□□□□ 0.9
C19orf44-202ENST00000593380 SLC24A1O60721 1099 aa20.67■□□□□ 0.9
C19orf44-202ENST00000593380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
C19orf44-202ENST00000593380 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
C19orf44-202ENST00000593380 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
C19orf44-202ENST00000593380 TTBK1Q5TCY1 1321 aaPredicted RBP20.51■□□□□ 0.87
C19orf44-202ENST00000593380 CENPBP07199 599 aaPredicted RBP20.5■□□□□ 0.87
C19orf44-202ENST00000593380 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
C19orf44-202ENST00000593380 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
C19orf44-202ENST00000593380 YTHDC1Q96MU7 727 aaKnown RBP20.43■□□□□ 0.86
C19orf44-202ENST00000593380 ABCC9O60706 1549 aa20.36■□□□□ 0.85
C19orf44-202ENST00000593380 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
C19orf44-202ENST00000593380 ERICH6Q7L0X2 663 aa20.24■□□□□ 0.83
C19orf44-202ENST00000593380 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
C19orf44-202ENST00000593380 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
C19orf44-202ENST00000593380 BCL11AQ9H165 835 aa20.13■□□□□ 0.81
C19orf44-202ENST00000593380 APLP2Q06481 763 aa19.97■□□□□ 0.79
C19orf44-202ENST00000593380 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
C19orf44-202ENST00000593380 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
C19orf44-202ENST00000593380 MIER1Q8N108 512 aa19.91■□□□□ 0.78
C19orf44-202ENST00000593380 WIZO95785 1651 aa19.83■□□□□ 0.77
C19orf44-202ENST00000593380 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.76
C19orf44-202ENST00000593380 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
C19orf44-202ENST00000593380 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
C19orf44-202ENST00000593380 UBTFP17480 764 aaKnown RBP19.68■□□□□ 0.74
C19orf44-202ENST00000593380 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
C19orf44-202ENST00000593380 NACADO15069 1562 aa19.6■□□□□ 0.73
C19orf44-202ENST00000593380 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
C19orf44-202ENST00000593380 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
C19orf44-202ENST00000593380 SOGA1O94964 1423 aa19.55■□□□□ 0.72
C19orf44-202ENST00000593380 BCANQ96GW7 911 aa19.51■□□□□ 0.71
C19orf44-202ENST00000593380 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
C19orf44-202ENST00000593380 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
C19orf44-202ENST00000593380 ANP32EQ9BTT0 268 aa19.48■□□□□ 0.71
C19orf44-202ENST00000593380 TSHZ2Q9NRE2 1034 aa19.45■□□□□ 0.7
C19orf44-202ENST00000593380 DAXXQ9UER7 740 aaPredicted RBP19.4■□□□□ 0.7
C19orf44-202ENST00000593380 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
C19orf44-202ENST00000593380 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
C19orf44-202ENST00000593380 EIF5BO60841 1220 aaKnown RBP19.37■□□□□ 0.69
C19orf44-202ENST00000593380 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
C19orf44-202ENST00000593380 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
C19orf44-202ENST00000593380 SMARCA4P51532 1647 aa19.24■□□□□ 0.67
C19orf44-202ENST00000593380 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
C19orf44-202ENST00000593380 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
C19orf44-202ENST00000593380 KCNH8Q96L42 1107 aa19.23■□□□□ 0.67
C19orf44-202ENST00000593380 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
C19orf44-202ENST00000593380 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
C19orf44-202ENST00000593380 FKBP8Q14318 412 aa19.2■□□□□ 0.66
C19orf44-202ENST00000593380 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
C19orf44-202ENST00000593380 ITGAEP38570 1179 aa19.14■□□□□ 0.65
C19orf44-202ENST00000593380 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
C19orf44-202ENST00000593380 NEFLP07196 543 aa19.04■□□□□ 0.64
C19orf44-202ENST00000593380 RBM19Q9Y4C8 960 aaKnown RBP19.04■□□□□ 0.64
C19orf44-202ENST00000593380 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
C19orf44-202ENST00000593380 CLIP1P30622 1438 aa19■□□□□ 0.63
C19orf44-202ENST00000593380 TRIM52Q96A61 297 aa18.99■□□□□ 0.63
C19orf44-202ENST00000593380 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
C19orf44-202ENST00000593380 DDX10Q13206 875 aaKnown RBP18.96■□□□□ 0.63
C19orf44-202ENST00000593380 RAPGEF2Q9Y4G8 1499 aa18.96■□□□□ 0.63
C19orf44-202ENST00000593380 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
C19orf44-202ENST00000593380 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
C19orf44-202ENST00000593380 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
C19orf44-202ENST00000593380 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
C19orf44-202ENST00000593380 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
C19orf44-202ENST00000593380 EEA1Q15075 1411 aa18.87■□□□□ 0.61
C19orf44-202ENST00000593380 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
C19orf44-202ENST00000593380 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
C19orf44-202ENST00000593380 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
C19orf44-202ENST00000593380 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
C19orf44-202ENST00000593380 ATP1B4Q9UN42 357 aaPredicted RBP18.84■□□□□ 0.61
C19orf44-202ENST00000593380 MSH5O43196 834 aa18.83■□□□□ 0.61
C19orf44-202ENST00000593380 ANO8Q9HCE9 1232 aaPredicted RBP18.8■□□□□ 0.6
C19orf44-202ENST00000593380 P3H3Q8IVL6 736 aa18.78■□□□□ 0.6
C19orf44-202ENST00000593380 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
C19orf44-202ENST00000593380 SIN3AQ96ST3 1273 aa18.7■□□□□ 0.58
C19orf44-202ENST00000593380 KIF21BO75037 1637 aa18.69■□□□□ 0.58
C19orf44-202ENST00000593380 ANP32CO43423 234 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms