RNA–Protein interactions for RNA: ENST00000593098.5

PIK3C3-215, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 3,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-215ENST00000593098 AEBP2Q6ZN18 517 aaPredicted RBP9.43□□□□□ -0.9
PIK3C3-215ENST00000593098 CHIC1Q5VXU3 224 aa9.24□□□□□ -0.93
PIK3C3-215ENST00000593098 PHF23Q9BUL5 403 aaPredicted RBP8.27□□□□□ -1.09
PIK3C3-215ENST00000593098 SENP3Q9H4L4 574 aaPredicted RBP7.72□□□□□ -1.17
PIK3C3-215ENST00000593098 PLPPR3Q6T4P5 718 aa7.38□□□□□ -1.23
PIK3C3-215ENST00000593098 FOXD1Q16676 465 aa7.27□□□□□ -1.25
PIK3C3-215ENST00000593098 PPP6R1Q9UPN7 881 aa7.14□□□□□ -1.27
PIK3C3-215ENST00000593098 ADRA2BP18089 450 aa7□□□□□ -1.29
PIK3C3-215ENST00000593098 DNAJC5BQ9UF47 199 aa6.73□□□□□ -1.33
PIK3C3-215ENST00000593098 PIAS4Q8N2W9 510 aaPredicted RBP6.61□□□□□ -1.35
PIK3C3-215ENST00000593098 KCNA4P22459 653 aa6.54□□□□□ -1.36
PIK3C3-215ENST00000593098 MSH5O43196 834 aa6.53□□□□□ -1.36
PIK3C3-215ENST00000593098 PPP4R3CPQ6ZMV5 832 aa6.52□□□□□ -1.36
PIK3C3-215ENST00000593098 NPM3O75607 178 aaKnown RBP6.39□□□□□ -1.39
PIK3C3-215ENST00000593098 HOXD11P31277 338 aaPredicted RBP6.36□□□□□ -1.39
PIK3C3-215ENST00000593098 CNKSR2Q8WXI2 1034 aa6.36□□□□□ -1.39
PIK3C3-215ENST00000593098 DMRT2Q9Y5R5 561 aa6.35□□□□□ -1.39
PIK3C3-215ENST00000593098 MAPK8IP2Q13387 824 aaPredicted RBP6.31□□□□□ -1.4
PIK3C3-215ENST00000593098 RNF216Q9NWF9 866 aaPredicted RBP6.3□□□□□ -1.4
PIK3C3-215ENST00000593098 POTEDQ86YR6 584 aa6.3□□□□□ -1.4
PIK3C3-215ENST00000593098 ZBTB22O15209 634 aa6.24□□□□□ -1.41
PIK3C3-215ENST00000593098 NCBP3Q53F19 620 aaKnown RBP6.22□□□□□ -1.41
PIK3C3-215ENST00000593098 SCAF1Q9H7N4 1312 aaKnown RBP6.19□□□□□ -1.42
PIK3C3-215ENST00000593098 CSRNP3Q8WYN3 585 aa6.18□□□□□ -1.42
PIK3C3-215ENST00000593098 SLC4A2P04920 1241 aa6.13□□□□□ -1.43
PIK3C3-215ENST00000593098 SLC4A1APQ9BWU0 796 aaKnown RBP6.08□□□□□ -1.44
PIK3C3-215ENST00000593098 FOXD4L1Q9NU39 408 aa5.94□□□□□ -1.46
PIK3C3-215ENST00000593098 ATXN8OSP0DMR3 200 aa5.91□□□□□ -1.46
PIK3C3-215ENST00000593098 EHMT2Q96KQ7 1210 aa5.83□□□□□ -1.48
PIK3C3-215ENST00000593098 U3KPZ7 1027 aaPredicted RBP5.83□□□□□ -1.48
PIK3C3-215ENST00000593098 ATF5Q9Y2D1 282 aaPredicted RBP5.81□□□□□ -1.48
PIK3C3-215ENST00000593098 MYCNP04198 464 aaPredicted RBP5.8□□□□□ -1.48
PIK3C3-215ENST00000593098 RNF39Q9H2S5 420 aa5.78□□□□□ -1.48
PIK3C3-215ENST00000593098 PROM2Q8N271 834 aa5.71□□□□□ -1.5
PIK3C3-215ENST00000593098 MKRN4PQ13434 485 aaPredicted RBP5.6□□□□□ -1.51
PIK3C3-215ENST00000593098 C1QBPQ07021 282 aaKnown RBP5.58□□□□□ -1.52
PIK3C3-215ENST00000593098 SAMD1Q6SPF0 538 aaPredicted RBP5.58□□□□□ -1.52
PIK3C3-215ENST00000593098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.56□□□□□ -1.52
PIK3C3-215ENST00000593098 HNRNPUL2Q1KMD3 747 aaKnown RBP5.56□□□□□ -1.52
PIK3C3-215ENST00000593098 ZNF219Q9P2Y4 722 aaPredicted RBP5.54□□□□□ -1.52
PIK3C3-215ENST00000593098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.51□□□□□ -1.53
PIK3C3-215ENST00000593098 SPINK5Q9NQ38 1064 aaPredicted RBP5.5□□□□□ -1.53
PIK3C3-215ENST00000593098 DSG3P32926 999 aa5.49□□□□□ -1.53
PIK3C3-215ENST00000593098 CCDC180Q9P1Z9 1646 aa5.41□□□□□ -1.54
PIK3C3-215ENST00000593098 APLP2Q06481 763 aa5.38□□□□□ -1.55
PIK3C3-215ENST00000593098 SSUH2Q9Y2M2 353 aa5.38□□□□□ -1.55
PIK3C3-215ENST00000593098 NISCHQ9Y2I1 1504 aa5.37□□□□□ -1.55
PIK3C3-215ENST00000593098 DCAF8L1A6NGE4 600 aa5.35□□□□□ -1.55
PIK3C3-215ENST00000593098 POLA2Q14181 598 aa5.31□□□□□ -1.56
PIK3C3-215ENST00000593098 FKBP8Q14318 412 aa5.25□□□□□ -1.57
PIK3C3-215ENST00000593098 ZBTB12Q9Y330 459 aaPredicted RBP5.25□□□□□ -1.57
PIK3C3-215ENST00000593098 SPDYE4A6NLX3 237 aa5.23□□□□□ -1.57
PIK3C3-215ENST00000593098 MNX1P50219 401 aaPredicted RBP5.21□□□□□ -1.58
PIK3C3-215ENST00000593098 SPDYE2BA6NHP3 402 aa5.18□□□□□ -1.58
PIK3C3-215ENST00000593098 SPDYE6P0CI01 402 aa5.18□□□□□ -1.58
PIK3C3-215ENST00000593098 SPDYE2Q495Y8 402 aa5.18□□□□□ -1.58
PIK3C3-215ENST00000593098 CAPN15O75808 1086 aa5.18□□□□□ -1.58
PIK3C3-215ENST00000593098 IFNLR1Q8IU57 520 aaPredicted RBP5.17□□□□□ -1.58
PIK3C3-215ENST00000593098 CACNB1Q02641 598 aaPredicted RBP5.17□□□□□ -1.58
PIK3C3-215ENST00000593098 TRHP20396 242 aaPredicted RBP5.16□□□□□ -1.58
PIK3C3-215ENST00000593098 SHROOM4Q9ULL8 1493 aa5.15□□□□□ -1.58
PIK3C3-215ENST00000593098 UNC13AQ9UPW8 1703 aa5.14□□□□□ -1.59
PIK3C3-215ENST00000593098 FBLN2P98095 1184 aa5.14□□□□□ -1.59
PIK3C3-215ENST00000593098 ABCB7O75027 752 aa5.14□□□□□ -1.59
PIK3C3-215ENST00000593098 OSCARQ8IYS5 282 aa5.14□□□□□ -1.59
PIK3C3-215ENST00000593098 DNAJC5Q9H3Z4 198 aa5.13□□□□□ -1.59
PIK3C3-215ENST00000593098 RTN4Q9NQC3 1192 aaKnown RBP5.12□□□□□ -1.59
PIK3C3-215ENST00000593098 PKD2Q13563 968 aa5.1□□□□□ -1.59
PIK3C3-215ENST00000593098 AMER1Q5JTC6 1135 aaPredicted RBP5.1□□□□□ -1.59
PIK3C3-215ENST00000593098 VASPP50552 380 aaPredicted RBP5.09□□□□□ -1.59
PIK3C3-215ENST00000593098 MYO15BQ96JP2 1530 aa5.09□□□□□ -1.59
PIK3C3-215ENST00000593098 AKT1S1Q96B36 256 aa5.09□□□□□ -1.59
PIK3C3-215ENST00000593098 CREBZFQ9NS37 354 aa5.08□□□□□ -1.6
PIK3C3-215ENST00000593098 FBXO3Q9UK99 471 aa5.06□□□□□ -1.6
PIK3C3-215ENST00000593098 STAG3Q9UJ98 1225 aa5.05□□□□□ -1.6
PIK3C3-215ENST00000593098 NUBP1P53384 320 aa5.04□□□□□ -1.6
PIK3C3-215ENST00000593098 FXR2P51116 673 aaKnown RBP eCLIP5.03□□□□□ -1.6
PIK3C3-215ENST00000593098 REM2Q8IYK8 340 aaPredicted RBP5.03□□□□□ -1.6
PIK3C3-215ENST00000593098 ZNF692Q9BU19 519 aaPredicted RBP5.02□□□□□ -1.61
PIK3C3-215ENST00000593098 CHRM1P11229 460 aaPredicted RBP5.01□□□□□ -1.61
PIK3C3-215ENST00000593098 PABPN1Q86U42 306 aaKnown RBP eCLIP5□□□□□ -1.61
PIK3C3-215ENST00000593098 BICRAQ9NZM4 1560 aa4.99□□□□□ -1.61
PIK3C3-215ENST00000593098 SGIP1Q9BQI5 828 aa4.98□□□□□ -1.61
PIK3C3-215ENST00000593098 PITPNM1O00562 1244 aa4.97□□□□□ -1.61
PIK3C3-215ENST00000593098 NACADO15069 1562 aa4.95□□□□□ -1.62
PIK3C3-215ENST00000593098 RB1CC1Q8TDY2 1594 aa4.95□□□□□ -1.62
PIK3C3-215ENST00000593098 RBM42Q9BTD8 480 aaKnown RBP4.95□□□□□ -1.62
PIK3C3-215ENST00000593098 RNF25Q96BH1 459 aaPredicted RBP4.94□□□□□ -1.62
PIK3C3-215ENST00000593098 ILDR1Q86SU0 546 aaPredicted RBP4.93□□□□□ -1.62
PIK3C3-215ENST00000593098 NPM1P06748 294 aaKnown RBP eCLIP4.93□□□□□ -1.62
PIK3C3-215ENST00000593098 SPOCK2Q92563 424 aa4.9□□□□□ -1.63
PIK3C3-215ENST00000593098 SPDYE1Q8NFV5 336 aaPredicted RBP4.89□□□□□ -1.63
PIK3C3-215ENST00000593098 PIP4P2Q8N4L2 257 aa4.86□□□□□ -1.63
PIK3C3-215ENST00000593098 CCDC61Q9Y6R9 512 aa4.86□□□□□ -1.63
PIK3C3-215ENST00000593098 RASEFQ8IZ41 740 aa4.85□□□□□ -1.63
PIK3C3-215ENST00000593098 RGL2O15211 777 aa4.84□□□□□ -1.63
PIK3C3-215ENST00000593098 ABCC9O60706 1549 aa4.84□□□□□ -1.64
PIK3C3-215ENST00000593098 C19orf67A6NJJ6 358 aa4.83□□□□□ -1.64
PIK3C3-215ENST00000593098 CUX2O14529 1486 aa4.83□□□□□ -1.64
PIK3C3-215ENST00000593098 NKX1-1Q15270 411 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms