RNA–Protein interactions for RNA: ENST00000590308.1

LDLRAD4-214, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

Gene LDLRAD4, Length 3,720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-214ENST00000590308 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
LDLRAD4-214ENST00000590308 HRCP23327 699 aa22.73■■□□□ 1.23
LDLRAD4-214ENST00000590308 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
LDLRAD4-214ENST00000590308 PPARGC1BQ86YN6 1023 aaKnown RBP22.54■■□□□ 1.2
LDLRAD4-214ENST00000590308 PCGF6Q9BYE7 350 aa22.38■■□□□ 1.17
LDLRAD4-214ENST00000590308 MYT1Q01538 1121 aa22.2■■□□□ 1.14
LDLRAD4-214ENST00000590308 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
LDLRAD4-214ENST00000590308 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
LDLRAD4-214ENST00000590308 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
LDLRAD4-214ENST00000590308 GTF3C3Q9Y5Q9 886 aa21.28■■□□□ 1
LDLRAD4-214ENST00000590308 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
LDLRAD4-214ENST00000590308 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
LDLRAD4-214ENST00000590308 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
LDLRAD4-214ENST00000590308 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
LDLRAD4-214ENST00000590308 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
LDLRAD4-214ENST00000590308 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
LDLRAD4-214ENST00000590308 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
LDLRAD4-214ENST00000590308 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
LDLRAD4-214ENST00000590308 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
LDLRAD4-214ENST00000590308 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
LDLRAD4-214ENST00000590308 BCL11AQ9H165 835 aa20.83■□□□□ 0.93
LDLRAD4-214ENST00000590308 TTBK1Q5TCY1 1321 aaPredicted RBP20.81■□□□□ 0.92
LDLRAD4-214ENST00000590308 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
LDLRAD4-214ENST00000590308 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
LDLRAD4-214ENST00000590308 EHMT2Q96KQ7 1210 aa20.6■□□□□ 0.89
LDLRAD4-214ENST00000590308 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
LDLRAD4-214ENST00000590308 CCER1Q8TC90 406 aaPredicted RBP20.58■□□□□ 0.88
LDLRAD4-214ENST00000590308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
LDLRAD4-214ENST00000590308 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
LDLRAD4-214ENST00000590308 ANP32EQ9BTT0 268 aa20.37■□□□□ 0.85
LDLRAD4-214ENST00000590308 PRKCSHP14314 528 aaPredicted RBP20.36■□□□□ 0.85
LDLRAD4-214ENST00000590308 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
LDLRAD4-214ENST00000590308 MIER1Q8N108 512 aa20.03■□□□□ 0.8
LDLRAD4-214ENST00000590308 ZNF316A6NFI3 1004 aaPredicted RBP20.02■□□□□ 0.79
LDLRAD4-214ENST00000590308 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
LDLRAD4-214ENST00000590308 TSHZ2Q9NRE2 1034 aa19.97■□□□□ 0.79
LDLRAD4-214ENST00000590308 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
LDLRAD4-214ENST00000590308 BCANQ96GW7 911 aa19.92■□□□□ 0.78
LDLRAD4-214ENST00000590308 SUPT16HQ9Y5B9 1047 aaKnown RBP19.91■□□□□ 0.78
LDLRAD4-214ENST00000590308 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
LDLRAD4-214ENST00000590308 ANO8Q9HCE9 1232 aaPredicted RBP19.56■□□□□ 0.72
LDLRAD4-214ENST00000590308 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
LDLRAD4-214ENST00000590308 FKBP8Q14318 412 aa19.53■□□□□ 0.72
LDLRAD4-214ENST00000590308 NEFLP07196 543 aa19.5■□□□□ 0.71
LDLRAD4-214ENST00000590308 ITGAEP38570 1179 aa19.48■□□□□ 0.71
LDLRAD4-214ENST00000590308 HNRNPUL2Q1KMD3 747 aaKnown RBP19.46■□□□□ 0.71
LDLRAD4-214ENST00000590308 CCDC136Q96JN2 1154 aa19.4■□□□□ 0.7
LDLRAD4-214ENST00000590308 DEKP35659 375 aaKnown RBP19.37■□□□□ 0.69
LDLRAD4-214ENST00000590308 APLP2Q06481 763 aa19.37■□□□□ 0.69
LDLRAD4-214ENST00000590308 MSH5O43196 834 aa19.27■□□□□ 0.68
LDLRAD4-214ENST00000590308 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
LDLRAD4-214ENST00000590308 NBR1Q14596 966 aa19.26■□□□□ 0.67
LDLRAD4-214ENST00000590308 RTN4Q9NQC3 1192 aaKnown RBP19.25■□□□□ 0.67
LDLRAD4-214ENST00000590308 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
LDLRAD4-214ENST00000590308 MYT1LQ9UL68 1186 aa19.16■□□□□ 0.66
LDLRAD4-214ENST00000590308 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
LDLRAD4-214ENST00000590308 ZCCHC6Q5VYS8 1495 aaKnown RBP19.15■□□□□ 0.66
LDLRAD4-214ENST00000590308 KCNH8Q96L42 1107 aa19.15■□□□□ 0.66
LDLRAD4-214ENST00000590308 EIF5BO60841 1220 aaKnown RBP19.12■□□□□ 0.65
LDLRAD4-214ENST00000590308 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
LDLRAD4-214ENST00000590308 TRIM52Q96A61 297 aa19.07■□□□□ 0.64
LDLRAD4-214ENST00000590308 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
LDLRAD4-214ENST00000590308 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
LDLRAD4-214ENST00000590308 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
LDLRAD4-214ENST00000590308 FANCIQ9NVI1 1328 aa18.95■□□□□ 0.62
LDLRAD4-214ENST00000590308 IL27Q8NEV9 243 aa18.94■□□□□ 0.62
LDLRAD4-214ENST00000590308 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
LDLRAD4-214ENST00000590308 UBE2Q2Q8WVN8 375 aa18.89■□□□□ 0.61
LDLRAD4-214ENST00000590308 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
LDLRAD4-214ENST00000590308 NOP58Q9Y2X3 529 aaKnown RBP18.84■□□□□ 0.61
LDLRAD4-214ENST00000590308 PAK3O75914 559 aaPredicted RBP18.72■□□□□ 0.59
LDLRAD4-214ENST00000590308 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
LDLRAD4-214ENST00000590308 ANP32CO43423 234 aa18.69■□□□□ 0.58
LDLRAD4-214ENST00000590308 PKNOX2Q96KN3 472 aa18.68■□□□□ 0.58
LDLRAD4-214ENST00000590308 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
LDLRAD4-214ENST00000590308 HIRIP3Q9BW71 556 aaPredicted RBP18.68■□□□□ 0.58
LDLRAD4-214ENST00000590308 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
LDLRAD4-214ENST00000590308 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.58
LDLRAD4-214ENST00000590308 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.58
LDLRAD4-214ENST00000590308 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
LDLRAD4-214ENST00000590308 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
LDLRAD4-214ENST00000590308 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.56
LDLRAD4-214ENST00000590308 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.56
LDLRAD4-214ENST00000590308 LAS1LQ9Y4W2 734 aaKnown RBP18.57■□□□□ 0.56
LDLRAD4-214ENST00000590308 PPP4R2Q9NY27 417 aa18.54■□□□□ 0.56
LDLRAD4-214ENST00000590308 NEFMP07197 916 aa18.53■□□□□ 0.56
LDLRAD4-214ENST00000590308 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
LDLRAD4-214ENST00000590308 BRPF3Q9ULD4 1205 aa18.47■□□□□ 0.55
LDLRAD4-214ENST00000590308 GLIPR1L2Q4G1C9 344 aa18.46■□□□□ 0.55
LDLRAD4-214ENST00000590308 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
LDLRAD4-214ENST00000590308 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
LDLRAD4-214ENST00000590308 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
LDLRAD4-214ENST00000590308 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
LDLRAD4-214ENST00000590308 PLEKHG5O94827 1062 aa18.39■□□□□ 0.54
LDLRAD4-214ENST00000590308 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
LDLRAD4-214ENST00000590308 PODXL2Q9NZ53 605 aa18.37■□□□□ 0.53
LDLRAD4-214ENST00000590308 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
LDLRAD4-214ENST00000590308 CNGB1Q14028 1251 aaPredicted RBP18.31■□□□□ 0.52
LDLRAD4-214ENST00000590308 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
LDLRAD4-214ENST00000590308 SOGA1O94964 1423 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms