RNA–Protein interactions for RNA: ENST00000587914.1

EFTUD2-208, Transcript of elongation factor Tu GTP binding domain containing 2, humanhuman

TSL 4

Gene EFTUD2, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFTUD2-208ENST00000587914 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
EFTUD2-208ENST00000587914 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
EFTUD2-208ENST00000587914 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
EFTUD2-208ENST00000587914 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
EFTUD2-208ENST00000587914 NISCHQ9Y2I1 1504 aa15.46■□□□□ 0.07
EFTUD2-208ENST00000587914 FOXD1Q16676 465 aa14.61□□□□□ -0.07
EFTUD2-208ENST00000587914 PLPPR3Q6T4P5 718 aa14.45□□□□□ -0.1
EFTUD2-208ENST00000587914 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
EFTUD2-208ENST00000587914 ADRA2BP18089 450 aa13.89□□□□□ -0.19
EFTUD2-208ENST00000587914 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
EFTUD2-208ENST00000587914 MSH5O43196 834 aa13.56□□□□□ -0.24
EFTUD2-208ENST00000587914 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
EFTUD2-208ENST00000587914 KCNA4P22459 653 aa13.44□□□□□ -0.26
EFTUD2-208ENST00000587914 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.28
EFTUD2-208ENST00000587914 ZCCHC6Q5VYS8 1495 aaKnown RBP13.06□□□□□ -0.32
EFTUD2-208ENST00000587914 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
EFTUD2-208ENST00000587914 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
EFTUD2-208ENST00000587914 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
EFTUD2-208ENST00000587914 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
EFTUD2-208ENST00000587914 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
EFTUD2-208ENST00000587914 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
EFTUD2-208ENST00000587914 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
EFTUD2-208ENST00000587914 SHROOM4Q9ULL8 1493 aa12.7□□□□□ -0.38
EFTUD2-208ENST00000587914 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
EFTUD2-208ENST00000587914 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
EFTUD2-208ENST00000587914 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
EFTUD2-208ENST00000587914 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
EFTUD2-208ENST00000587914 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
EFTUD2-208ENST00000587914 SUPT5HO00267 1087 aaKnown RBP12.4□□□□□ -0.42
EFTUD2-208ENST00000587914 ZBTB22O15209 634 aa12.37□□□□□ -0.43
EFTUD2-208ENST00000587914 NACADO15069 1562 aa12.37□□□□□ -0.43
EFTUD2-208ENST00000587914 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
EFTUD2-208ENST00000587914 ABCC9O60706 1549 aa12.27□□□□□ -0.45
EFTUD2-208ENST00000587914 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
EFTUD2-208ENST00000587914 SCRIBQ14160 1630 aa12.21□□□□□ -0.46
EFTUD2-208ENST00000587914 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
EFTUD2-208ENST00000587914 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
EFTUD2-208ENST00000587914 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
EFTUD2-208ENST00000587914 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
EFTUD2-208ENST00000587914 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
EFTUD2-208ENST00000587914 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
EFTUD2-208ENST00000587914 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
EFTUD2-208ENST00000587914 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
EFTUD2-208ENST00000587914 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
EFTUD2-208ENST00000587914 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
EFTUD2-208ENST00000587914 CECR2Q9BXF3 1484 aa11.92□□□□□ -0.5
EFTUD2-208ENST00000587914 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
EFTUD2-208ENST00000587914 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
EFTUD2-208ENST00000587914 WIZO95785 1651 aa11.78□□□□□ -0.52
EFTUD2-208ENST00000587914 UNC13AQ9UPW8 1703 aa11.77□□□□□ -0.52
EFTUD2-208ENST00000587914 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
EFTUD2-208ENST00000587914 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
EFTUD2-208ENST00000587914 TRIM41Q8WV44 630 aa11.71□□□□□ -0.53
EFTUD2-208ENST00000587914 FKBP8Q14318 412 aa11.69□□□□□ -0.54
EFTUD2-208ENST00000587914 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
EFTUD2-208ENST00000587914 EIF4G1Q04637 1599 aaKnown RBP11.67□□□□□ -0.54
EFTUD2-208ENST00000587914 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
EFTUD2-208ENST00000587914 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
EFTUD2-208ENST00000587914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.63□□□□□ -0.55
EFTUD2-208ENST00000587914 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
EFTUD2-208ENST00000587914 CCDC88BA6NC98 1476 aa11.62□□□□□ -0.55
EFTUD2-208ENST00000587914 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
EFTUD2-208ENST00000587914 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
EFTUD2-208ENST00000587914 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
EFTUD2-208ENST00000587914 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
EFTUD2-208ENST00000587914 ATAD2BQ9ULI0 1458 aa11.54□□□□□ -0.56
EFTUD2-208ENST00000587914 CACNB1Q02641 598 aaPredicted RBP11.49□□□□□ -0.57
EFTUD2-208ENST00000587914 BAZ1BQ9UIG0 1483 aaKnown RBP11.49□□□□□ -0.57
EFTUD2-208ENST00000587914 EEA1Q15075 1411 aa11.48□□□□□ -0.57
EFTUD2-208ENST00000587914 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
EFTUD2-208ENST00000587914 TRIM26Q12899 539 aaPredicted RBP11.43□□□□□ -0.58
EFTUD2-208ENST00000587914 HMGXB3Q12766 1538 aa11.43□□□□□ -0.58
EFTUD2-208ENST00000587914 NCAPD3P42695 1498 aa11.43□□□□□ -0.58
EFTUD2-208ENST00000587914 HRCP23327 699 aa11.42□□□□□ -0.58
EFTUD2-208ENST00000587914 FAM9AQ8IZU1 332 aaPredicted RBP11.41□□□□□ -0.58
EFTUD2-208ENST00000587914 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
EFTUD2-208ENST00000587914 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
EFTUD2-208ENST00000587914 WRNQ14191 1432 aaPredicted RBP eCLIP11.39□□□□□ -0.59
EFTUD2-208ENST00000587914 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
EFTUD2-208ENST00000587914 TNIKQ9UKE5 1360 aa11.31□□□□□ -0.6
EFTUD2-208ENST00000587914 SOGA1O94964 1423 aa11.3□□□□□ -0.6
EFTUD2-208ENST00000587914 GOLGA3Q08378 1498 aa11.27□□□□□ -0.6
EFTUD2-208ENST00000587914 SYNJ1O43426 1573 aa11.27□□□□□ -0.61
EFTUD2-208ENST00000587914 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
EFTUD2-208ENST00000587914 CFTRP13569 1480 aa11.25□□□□□ -0.61
EFTUD2-208ENST00000587914 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
EFTUD2-208ENST00000587914 KIF21BO75037 1637 aa11.24□□□□□ -0.61
EFTUD2-208ENST00000587914 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
EFTUD2-208ENST00000587914 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
EFTUD2-208ENST00000587914 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
EFTUD2-208ENST00000587914 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
EFTUD2-208ENST00000587914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.19□□□□□ -0.62
EFTUD2-208ENST00000587914 HNRNPUL2Q1KMD3 747 aaKnown RBP11.19□□□□□ -0.62
EFTUD2-208ENST00000587914 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
EFTUD2-208ENST00000587914 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.62
EFTUD2-208ENST00000587914 CADPSQ9ULU8 1353 aa11.15□□□□□ -0.63
EFTUD2-208ENST00000587914 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
EFTUD2-208ENST00000587914 CAPN15O75808 1086 aa11.13□□□□□ -0.63
EFTUD2-208ENST00000587914 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
EFTUD2-208ENST00000587914 CUX1P39880 1505 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms