RNA–Protein interactions for RNA: ENST00000572251.1

FBXO39-202, Transcript of F-box protein 39, humanhuman

TSL 1 (best)

Gene FBXO39, Length 917 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39-202ENST00000572251 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
FBXO39-202ENST00000572251 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
FBXO39-202ENST00000572251 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
FBXO39-202ENST00000572251 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
FBXO39-202ENST00000572251 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
FBXO39-202ENST00000572251 FOXD1Q16676 465 aa19.22■□□□□ 0.67
FBXO39-202ENST00000572251 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
FBXO39-202ENST00000572251 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
FBXO39-202ENST00000572251 ADRA2BP18089 450 aa18.53■□□□□ 0.56
FBXO39-202ENST00000572251 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
FBXO39-202ENST00000572251 MSH5O43196 834 aa17.92■□□□□ 0.46
FBXO39-202ENST00000572251 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
FBXO39-202ENST00000572251 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
FBXO39-202ENST00000572251 KCNA4P22459 653 aa16.98■□□□□ 0.31
FBXO39-202ENST00000572251 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
FBXO39-202ENST00000572251 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
FBXO39-202ENST00000572251 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
FBXO39-202ENST00000572251 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
FBXO39-202ENST00000572251 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
FBXO39-202ENST00000572251 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
FBXO39-202ENST00000572251 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
FBXO39-202ENST00000572251 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
FBXO39-202ENST00000572251 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
FBXO39-202ENST00000572251 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
FBXO39-202ENST00000572251 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
FBXO39-202ENST00000572251 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
FBXO39-202ENST00000572251 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
FBXO39-202ENST00000572251 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
FBXO39-202ENST00000572251 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
FBXO39-202ENST00000572251 ZBTB22O15209 634 aa15.61■□□□□ 0.09
FBXO39-202ENST00000572251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.07
FBXO39-202ENST00000572251 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
FBXO39-202ENST00000572251 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
FBXO39-202ENST00000572251 NISCHQ9Y2I1 1504 aa15.26■□□□□ 0.03
FBXO39-202ENST00000572251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
FBXO39-202ENST00000572251 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
FBXO39-202ENST00000572251 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
FBXO39-202ENST00000572251 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
FBXO39-202ENST00000572251 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
FBXO39-202ENST00000572251 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
FBXO39-202ENST00000572251 APLP2Q06481 763 aa15.04■□□□□ -0
FBXO39-202ENST00000572251 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
FBXO39-202ENST00000572251 POTEHQ6S545 545 aa14.84□□□□□ -0.03
FBXO39-202ENST00000572251 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
FBXO39-202ENST00000572251 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
FBXO39-202ENST00000572251 CAPN15O75808 1086 aa14.68□□□□□ -0.06
FBXO39-202ENST00000572251 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
FBXO39-202ENST00000572251 DSG3P32926 999 aa14.49□□□□□ -0.09
FBXO39-202ENST00000572251 POLA2Q14181 598 aa14.47□□□□□ -0.09
FBXO39-202ENST00000572251 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
FBXO39-202ENST00000572251 ABCB7O75027 752 aa14.36□□□□□ -0.11
FBXO39-202ENST00000572251 FBLN2P98095 1184 aa14.3□□□□□ -0.12
FBXO39-202ENST00000572251 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
FBXO39-202ENST00000572251 FKBP8Q14318 412 aa14.1□□□□□ -0.15
FBXO39-202ENST00000572251 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
FBXO39-202ENST00000572251 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
FBXO39-202ENST00000572251 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
FBXO39-202ENST00000572251 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
FBXO39-202ENST00000572251 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
FBXO39-202ENST00000572251 PROM2Q8N271 834 aa13.93□□□□□ -0.18
FBXO39-202ENST00000572251 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
FBXO39-202ENST00000572251 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
FBXO39-202ENST00000572251 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
FBXO39-202ENST00000572251 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
FBXO39-202ENST00000572251 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
FBXO39-202ENST00000572251 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
FBXO39-202ENST00000572251 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
FBXO39-202ENST00000572251 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
FBXO39-202ENST00000572251 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
FBXO39-202ENST00000572251 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
FBXO39-202ENST00000572251 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
FBXO39-202ENST00000572251 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
FBXO39-202ENST00000572251 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
FBXO39-202ENST00000572251 ABCC9O60706 1549 aa13.38□□□□□ -0.27
FBXO39-202ENST00000572251 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
FBXO39-202ENST00000572251 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
FBXO39-202ENST00000572251 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
FBXO39-202ENST00000572251 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
FBXO39-202ENST00000572251 MIER1Q8N108 512 aa13.24□□□□□ -0.29
FBXO39-202ENST00000572251 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
FBXO39-202ENST00000572251 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
FBXO39-202ENST00000572251 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
FBXO39-202ENST00000572251 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
FBXO39-202ENST00000572251 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
FBXO39-202ENST00000572251 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
FBXO39-202ENST00000572251 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
FBXO39-202ENST00000572251 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
FBXO39-202ENST00000572251 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
FBXO39-202ENST00000572251 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
FBXO39-202ENST00000572251 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
FBXO39-202ENST00000572251 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
FBXO39-202ENST00000572251 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
FBXO39-202ENST00000572251 NUBP1P53384 320 aa12.96□□□□□ -0.33
FBXO39-202ENST00000572251 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
FBXO39-202ENST00000572251 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
FBXO39-202ENST00000572251 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
FBXO39-202ENST00000572251 HAX1O00165 279 aa12.91□□□□□ -0.34
FBXO39-202ENST00000572251 NACADO15069 1562 aa12.9□□□□□ -0.34
FBXO39-202ENST00000572251 PKD2Q13563 968 aa12.87□□□□□ -0.35
FBXO39-202ENST00000572251 GSE1Q14687 1217 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms