RNA–Protein interactions for RNA: ENST00000571275.1

MYH11-205, Transcript of myosin heavy chain 11, humanhuman

TSL 1 (best)

Gene MYH11, Length 4,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYH11-205ENST00000571275 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
MYH11-205ENST00000571275 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
MYH11-205ENST00000571275 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
MYH11-205ENST00000571275 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
MYH11-205ENST00000571275 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
MYH11-205ENST00000571275 HRCP23327 699 aa20.28■□□□□ 0.84
MYH11-205ENST00000571275 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
MYH11-205ENST00000571275 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
MYH11-205ENST00000571275 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
MYH11-205ENST00000571275 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
MYH11-205ENST00000571275 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
MYH11-205ENST00000571275 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
MYH11-205ENST00000571275 LOC105371045A0A1W2PR82 267 aa19.7■□□□□ 0.74
MYH11-205ENST00000571275 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
MYH11-205ENST00000571275 CENPBP07199 599 aaPredicted RBP19.54■□□□□ 0.72
MYH11-205ENST00000571275 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
MYH11-205ENST00000571275 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
MYH11-205ENST00000571275 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
MYH11-205ENST00000571275 MYT1Q01538 1121 aa19.29■□□□□ 0.68
MYH11-205ENST00000571275 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
MYH11-205ENST00000571275 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
MYH11-205ENST00000571275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.65
MYH11-205ENST00000571275 APLP2Q06481 763 aa19.05■□□□□ 0.64
MYH11-205ENST00000571275 DIEXFQ68CQ4 756 aaKnown RBP19■□□□□ 0.63
MYH11-205ENST00000571275 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
MYH11-205ENST00000571275 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
MYH11-205ENST00000571275 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
MYH11-205ENST00000571275 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
MYH11-205ENST00000571275 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
MYH11-205ENST00000571275 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
MYH11-205ENST00000571275 NEUROD1Q13562 356 aa18.73■□□□□ 0.59
MYH11-205ENST00000571275 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
MYH11-205ENST00000571275 ZCCHC6Q5VYS8 1495 aaKnown RBP18.7■□□□□ 0.58
MYH11-205ENST00000571275 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
MYH11-205ENST00000571275 ZNF316A6NFI3 1004 aaPredicted RBP18.54■□□□□ 0.56
MYH11-205ENST00000571275 NEFLP07196 543 aa18.53■□□□□ 0.56
MYH11-205ENST00000571275 CCDC180Q9P1Z9 1646 aa18.48■□□□□ 0.55
MYH11-205ENST00000571275 ITGAEP38570 1179 aa18.36■□□□□ 0.53
MYH11-205ENST00000571275 BCANQ96GW7 911 aa18.3■□□□□ 0.52
MYH11-205ENST00000571275 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.52
MYH11-205ENST00000571275 MIER1Q8N108 512 aa18.22■□□□□ 0.51
MYH11-205ENST00000571275 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
MYH11-205ENST00000571275 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
MYH11-205ENST00000571275 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
MYH11-205ENST00000571275 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
MYH11-205ENST00000571275 FKBP8Q14318 412 aa17.94■□□□□ 0.46
MYH11-205ENST00000571275 ABCC9O60706 1549 aa17.89■□□□□ 0.45
MYH11-205ENST00000571275 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
MYH11-205ENST00000571275 FAM50AQ14320 339 aaKnown RBP17.86■□□□□ 0.45
MYH11-205ENST00000571275 ANP32CO43423 234 aa17.85■□□□□ 0.45
MYH11-205ENST00000571275 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
MYH11-205ENST00000571275 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
MYH11-205ENST00000571275 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
MYH11-205ENST00000571275 DDX10Q13206 875 aaKnown RBP17.79■□□□□ 0.44
MYH11-205ENST00000571275 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
MYH11-205ENST00000571275 POLR3GLQ9BT43 218 aa17.76■□□□□ 0.43
MYH11-205ENST00000571275 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
MYH11-205ENST00000571275 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
MYH11-205ENST00000571275 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
MYH11-205ENST00000571275 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
MYH11-205ENST00000571275 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
MYH11-205ENST00000571275 CLIP1P30622 1438 aa17.67■□□□□ 0.42
MYH11-205ENST00000571275 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
MYH11-205ENST00000571275 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
MYH11-205ENST00000571275 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
MYH11-205ENST00000571275 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
MYH11-205ENST00000571275 BCL11AQ9H165 835 aa17.58■□□□□ 0.4
MYH11-205ENST00000571275 IRX6P78412 446 aaPredicted RBP17.56■□□□□ 0.4
MYH11-205ENST00000571275 EEA1Q15075 1411 aa17.55■□□□□ 0.4
MYH11-205ENST00000571275 TSHZ2Q9NRE2 1034 aa17.55■□□□□ 0.4
MYH11-205ENST00000571275 SOGA1O94964 1423 aa17.55■□□□□ 0.4
MYH11-205ENST00000571275 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
MYH11-205ENST00000571275 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
MYH11-205ENST00000571275 NBR1Q14596 966 aa17.44■□□□□ 0.38
MYH11-205ENST00000571275 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
MYH11-205ENST00000571275 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
MYH11-205ENST00000571275 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
MYH11-205ENST00000571275 ANP32AP39687 249 aaKnown RBP17.42■□□□□ 0.38
MYH11-205ENST00000571275 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
MYH11-205ENST00000571275 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
MYH11-205ENST00000571275 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
MYH11-205ENST00000571275 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
MYH11-205ENST00000571275 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
MYH11-205ENST00000571275 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
MYH11-205ENST00000571275 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
MYH11-205ENST00000571275 SIN3AQ96ST3 1273 aa17.35■□□□□ 0.37
MYH11-205ENST00000571275 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
MYH11-205ENST00000571275 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
MYH11-205ENST00000571275 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
MYH11-205ENST00000571275 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
MYH11-205ENST00000571275 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
MYH11-205ENST00000571275 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
MYH11-205ENST00000571275 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
MYH11-205ENST00000571275 WIZO95785 1651 aa17.24■□□□□ 0.35
MYH11-205ENST00000571275 ZBTB47Q9UFB7 747 aaPredicted RBP17.23■□□□□ 0.35
MYH11-205ENST00000571275 CCNB3Q8WWL7 1395 aa17.21■□□□□ 0.35
MYH11-205ENST00000571275 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
MYH11-205ENST00000571275 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
MYH11-205ENST00000571275 ARID3CA6NKF2 412 aa17.16■□□□□ 0.34
MYH11-205ENST00000571275 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms