RNA–Protein interactions for RNA: ENST00000564725.1

PML-212, Transcript of promyelocytic leukemia, humanhuman

TSL 1 (best)

Gene PML, Length 4,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-212ENST00000564725 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
PML-212ENST00000564725 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
PML-212ENST00000564725 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
PML-212ENST00000564725 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
PML-212ENST00000564725 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
PML-212ENST00000564725 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
PML-212ENST00000564725 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
PML-212ENST00000564725 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
PML-212ENST00000564725 ZEB1P37275 1124 aaPredicted RBP23.29■■□□□ 1.32
PML-212ENST00000564725 APLP2Q06481 763 aa23.26■■□□□ 1.31
PML-212ENST00000564725 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
PML-212ENST00000564725 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
PML-212ENST00000564725 HRCP23327 699 aa22.99■■□□□ 1.27
PML-212ENST00000564725 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
PML-212ENST00000564725 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
PML-212ENST00000564725 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
PML-212ENST00000564725 CENPBP07199 599 aaPredicted RBP22.84■■□□□ 1.25
PML-212ENST00000564725 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.24
PML-212ENST00000564725 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
PML-212ENST00000564725 RANGAP1P46060 587 aaPredicted RBP22.61■■□□□ 1.21
PML-212ENST00000564725 PPARGC1BQ86YN6 1023 aaKnown RBP22.54■■□□□ 1.2
PML-212ENST00000564725 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
PML-212ENST00000564725 ZCCHC6Q5VYS8 1495 aaKnown RBP22.24■■□□□ 1.15
PML-212ENST00000564725 YTHDC1Q96MU7 727 aaKnown RBP22.22■■□□□ 1.15
PML-212ENST00000564725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.06■■□□□ 1.12
PML-212ENST00000564725 ABCC9O60706 1549 aa22.06■■□□□ 1.12
PML-212ENST00000564725 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
PML-212ENST00000564725 MYT1Q01538 1121 aa22.03■■□□□ 1.12
PML-212ENST00000564725 NEFLP07196 543 aa22.01■■□□□ 1.11
PML-212ENST00000564725 DIEXFQ68CQ4 756 aaKnown RBP21.94■■□□□ 1.1
PML-212ENST00000564725 CCDC180Q9P1Z9 1646 aa21.93■■□□□ 1.1
PML-212ENST00000564725 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
PML-212ENST00000564725 ERICH6Q7L0X2 663 aa21.89■■□□□ 1.1
PML-212ENST00000564725 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
PML-212ENST00000564725 ITGAEP38570 1179 aa21.88■■□□□ 1.09
PML-212ENST00000564725 CSRNP3Q8WYN3 585 aa21.66■■□□□ 1.06
PML-212ENST00000564725 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
PML-212ENST00000564725 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
PML-212ENST00000564725 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
PML-212ENST00000564725 GTF3C3Q9Y5Q9 886 aa21.51■■□□□ 1.03
PML-212ENST00000564725 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
PML-212ENST00000564725 ACIN1Q9UKV3 1341 aaKnown RBP21.43■■□□□ 1.02
PML-212ENST00000564725 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.01
PML-212ENST00000564725 POLR3GLQ9BT43 218 aa21.31■■□□□ 1
PML-212ENST00000564725 NEUROD1Q13562 356 aa21.29■■□□□ 1
PML-212ENST00000564725 ANP32CO43423 234 aa21.18■□□□□ 0.98
PML-212ENST00000564725 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
PML-212ENST00000564725 CNGB1Q14028 1251 aaPredicted RBP21.11■□□□□ 0.97
PML-212ENST00000564725 EEA1Q15075 1411 aa21.1■□□□□ 0.97
PML-212ENST00000564725 NACADO15069 1562 aa21.07■□□□□ 0.96
PML-212ENST00000564725 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
PML-212ENST00000564725 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
PML-212ENST00000564725 P3H3Q8IVL6 736 aa21.03■□□□□ 0.96
PML-212ENST00000564725 BCANQ96GW7 911 aa21.02■□□□□ 0.96
PML-212ENST00000564725 DAXXQ9UER7 740 aaPredicted RBP21.01■□□□□ 0.95
PML-212ENST00000564725 CEP162Q5TB80 1403 aa21■□□□□ 0.95
PML-212ENST00000564725 CLIP1P30622 1438 aa21■□□□□ 0.95
PML-212ENST00000564725 MYT1LQ9UL68 1186 aa21■□□□□ 0.95
PML-212ENST00000564725 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
PML-212ENST00000564725 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
PML-212ENST00000564725 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
PML-212ENST00000564725 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
PML-212ENST00000564725 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
PML-212ENST00000564725 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
PML-212ENST00000564725 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
PML-212ENST00000564725 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
PML-212ENST00000564725 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
PML-212ENST00000564725 MIER1Q8N108 512 aa20.82■□□□□ 0.92
PML-212ENST00000564725 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
PML-212ENST00000564725 RTL5Q5HYW3 569 aaPredicted RBP20.8■□□□□ 0.92
PML-212ENST00000564725 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
PML-212ENST00000564725 FBLN2P98095 1184 aa20.77■□□□□ 0.92
PML-212ENST00000564725 DDX10Q13206 875 aaKnown RBP20.77■□□□□ 0.92
PML-212ENST00000564725 FKBP8Q14318 412 aa20.7■□□□□ 0.9
PML-212ENST00000564725 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
PML-212ENST00000564725 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
PML-212ENST00000564725 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
PML-212ENST00000564725 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
PML-212ENST00000564725 MTUS2Q5JR59 1369 aa20.6■□□□□ 0.89
PML-212ENST00000564725 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
PML-212ENST00000564725 SOGA1O94964 1423 aa20.59■□□□□ 0.89
PML-212ENST00000564725 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.89
PML-212ENST00000564725 CHIC2Q9UKJ5 165 aa20.51■□□□□ 0.87
PML-212ENST00000564725 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
PML-212ENST00000564725 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
PML-212ENST00000564725 ANP32AP39687 249 aaKnown RBP20.45■□□□□ 0.86
PML-212ENST00000564725 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
PML-212ENST00000564725 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
PML-212ENST00000564725 HIRIP3Q9BW71 556 aaPredicted RBP20.41■□□□□ 0.86
PML-212ENST00000564725 EIF4G2P78344 907 aaKnown RBP eCLIP20.4■□□□□ 0.86
PML-212ENST00000564725 CCNB3Q8WWL7 1395 aa20.38■□□□□ 0.85
PML-212ENST00000564725 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
PML-212ENST00000564725 WIZO95785 1651 aa20.34■□□□□ 0.85
PML-212ENST00000564725 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
PML-212ENST00000564725 RRP7BPQ9NSQ0 103 aa20.33■□□□□ 0.85
PML-212ENST00000564725 TMC1Q8TDI8 760 aa20.33■□□□□ 0.84
PML-212ENST00000564725 FHAD1B1AJZ9 1412 aa20.3■□□□□ 0.84
PML-212ENST00000564725 TSPY4P0CV99 314 aa20.3■□□□□ 0.84
PML-212ENST00000564725 TSPY10P0CW01 314 aa20.3■□□□□ 0.84
PML-212ENST00000564725 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms