RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
TCF4-220ENST00000563824 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
TCF4-220ENST00000563824 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
TCF4-220ENST00000563824 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
TCF4-220ENST00000563824 FOXD1Q16676 465 aa17.8■□□□□ 0.44
TCF4-220ENST00000563824 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
TCF4-220ENST00000563824 MSH5O43196 834 aa16.78■□□□□ 0.28
TCF4-220ENST00000563824 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
TCF4-220ENST00000563824 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
TCF4-220ENST00000563824 PPP6R1Q9UPN7 881 aa16.3■□□□□ 0.2
TCF4-220ENST00000563824 ADRA2BP18089 450 aa16.15■□□□□ 0.18
TCF4-220ENST00000563824 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
TCF4-220ENST00000563824 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
TCF4-220ENST00000563824 KCNA4P22459 653 aa14.98□□□□□ -0.01
TCF4-220ENST00000563824 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
TCF4-220ENST00000563824 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
TCF4-220ENST00000563824 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
TCF4-220ENST00000563824 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
TCF4-220ENST00000563824 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
TCF4-220ENST00000563824 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
TCF4-220ENST00000563824 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
TCF4-220ENST00000563824 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
TCF4-220ENST00000563824 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
TCF4-220ENST00000563824 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
TCF4-220ENST00000563824 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
TCF4-220ENST00000563824 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
TCF4-220ENST00000563824 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
TCF4-220ENST00000563824 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
TCF4-220ENST00000563824 NISCHQ9Y2I1 1504 aa13.98□□□□□ -0.17
TCF4-220ENST00000563824 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
TCF4-220ENST00000563824 ZBTB22O15209 634 aa13.76□□□□□ -0.21
TCF4-220ENST00000563824 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
TCF4-220ENST00000563824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
TCF4-220ENST00000563824 POTEHQ6S545 545 aa13.41□□□□□ -0.26
TCF4-220ENST00000563824 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
TCF4-220ENST00000563824 DSG3P32926 999 aa13.25□□□□□ -0.29
TCF4-220ENST00000563824 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
TCF4-220ENST00000563824 ABCC9O60706 1549 aa13.19□□□□□ -0.3
TCF4-220ENST00000563824 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
TCF4-220ENST00000563824 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
TCF4-220ENST00000563824 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
TCF4-220ENST00000563824 CAPN15O75808 1086 aa13.08□□□□□ -0.32
TCF4-220ENST00000563824 FKBP8Q14318 412 aa12.85□□□□□ -0.35
TCF4-220ENST00000563824 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
TCF4-220ENST00000563824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
TCF4-220ENST00000563824 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
TCF4-220ENST00000563824 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
TCF4-220ENST00000563824 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
TCF4-220ENST00000563824 ABCB7O75027 752 aa12.75□□□□□ -0.37
TCF4-220ENST00000563824 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
TCF4-220ENST00000563824 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
TCF4-220ENST00000563824 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
TCF4-220ENST00000563824 APLP2Q06481 763 aa12.69□□□□□ -0.38
TCF4-220ENST00000563824 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
TCF4-220ENST00000563824 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
TCF4-220ENST00000563824 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
TCF4-220ENST00000563824 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
TCF4-220ENST00000563824 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
TCF4-220ENST00000563824 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
TCF4-220ENST00000563824 POLA2Q14181 598 aa12.37□□□□□ -0.43
TCF4-220ENST00000563824 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
TCF4-220ENST00000563824 NACADO15069 1562 aa12.28□□□□□ -0.44
TCF4-220ENST00000563824 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.45
TCF4-220ENST00000563824 FBLN2P98095 1184 aa12.27□□□□□ -0.45
TCF4-220ENST00000563824 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
TCF4-220ENST00000563824 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
TCF4-220ENST00000563824 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
TCF4-220ENST00000563824 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
TCF4-220ENST00000563824 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
TCF4-220ENST00000563824 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
TCF4-220ENST00000563824 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.47
TCF4-220ENST00000563824 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
TCF4-220ENST00000563824 PROM2Q8N271 834 aa12.05□□□□□ -0.48
TCF4-220ENST00000563824 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
TCF4-220ENST00000563824 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
TCF4-220ENST00000563824 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
TCF4-220ENST00000563824 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.49
TCF4-220ENST00000563824 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
TCF4-220ENST00000563824 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
TCF4-220ENST00000563824 HAX1O00165 279 aa11.99□□□□□ -0.49
TCF4-220ENST00000563824 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
TCF4-220ENST00000563824 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
TCF4-220ENST00000563824 CC2D2AQ9P2K1 1620 aa11.94□□□□□ -0.5
TCF4-220ENST00000563824 DCAF8L2P0C7V8 631 aa11.93□□□□□ -0.5
TCF4-220ENST00000563824 EVX2Q03828 476 aa11.93□□□□□ -0.5
TCF4-220ENST00000563824 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
TCF4-220ENST00000563824 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
TCF4-220ENST00000563824 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
TCF4-220ENST00000563824 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
TCF4-220ENST00000563824 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
TCF4-220ENST00000563824 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
TCF4-220ENST00000563824 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
TCF4-220ENST00000563824 CUX2O14529 1486 aa11.75□□□□□ -0.53
TCF4-220ENST00000563824 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.53
TCF4-220ENST00000563824 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
TCF4-220ENST00000563824 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
TCF4-220ENST00000563824 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
TCF4-220ENST00000563824 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
TCF4-220ENST00000563824 PKD2Q13563 968 aa11.67□□□□□ -0.54
TCF4-220ENST00000563824 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms