RNA–Protein interactions for RNA: ENST00000563221.5

NAE1-210, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-210ENST00000563221 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
NAE1-210ENST00000563221 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
NAE1-210ENST00000563221 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
NAE1-210ENST00000563221 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
NAE1-210ENST00000563221 FOXD1Q16676 465 aa21.47■■□□□ 1.03
NAE1-210ENST00000563221 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
NAE1-210ENST00000563221 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
NAE1-210ENST00000563221 ADRA2BP18089 450 aa20.36■□□□□ 0.85
NAE1-210ENST00000563221 PIAS4Q8N2W9 510 aaPredicted RBP20.18■□□□□ 0.82
NAE1-210ENST00000563221 MSH5O43196 834 aa19.9■□□□□ 0.78
NAE1-210ENST00000563221 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
NAE1-210ENST00000563221 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
NAE1-210ENST00000563221 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
NAE1-210ENST00000563221 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
NAE1-210ENST00000563221 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
NAE1-210ENST00000563221 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
NAE1-210ENST00000563221 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
NAE1-210ENST00000563221 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
NAE1-210ENST00000563221 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
NAE1-210ENST00000563221 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
NAE1-210ENST00000563221 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
NAE1-210ENST00000563221 KCNA4P22459 653 aa17.66■□□□□ 0.42
NAE1-210ENST00000563221 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
NAE1-210ENST00000563221 CCDC180Q9P1Z9 1646 aa17.17■□□□□ 0.34
NAE1-210ENST00000563221 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
NAE1-210ENST00000563221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
NAE1-210ENST00000563221 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
NAE1-210ENST00000563221 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
NAE1-210ENST00000563221 ABCC9O60706 1549 aa16.88■□□□□ 0.29
NAE1-210ENST00000563221 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
NAE1-210ENST00000563221 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
NAE1-210ENST00000563221 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
NAE1-210ENST00000563221 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
NAE1-210ENST00000563221 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
NAE1-210ENST00000563221 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
NAE1-210ENST00000563221 CAPN15O75808 1086 aa16.33■□□□□ 0.2
NAE1-210ENST00000563221 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
NAE1-210ENST00000563221 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
NAE1-210ENST00000563221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
NAE1-210ENST00000563221 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
NAE1-210ENST00000563221 ZBTB22O15209 634 aa16.25■□□□□ 0.19
NAE1-210ENST00000563221 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
NAE1-210ENST00000563221 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
NAE1-210ENST00000563221 APLP2Q06481 763 aa16.19■□□□□ 0.18
NAE1-210ENST00000563221 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
NAE1-210ENST00000563221 NACADO15069 1562 aa16.15■□□□□ 0.18
NAE1-210ENST00000563221 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
NAE1-210ENST00000563221 DSG3P32926 999 aa16.09■□□□□ 0.17
NAE1-210ENST00000563221 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
NAE1-210ENST00000563221 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
NAE1-210ENST00000563221 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
NAE1-210ENST00000563221 ABCB7O75027 752 aa16.02■□□□□ 0.16
NAE1-210ENST00000563221 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
NAE1-210ENST00000563221 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
NAE1-210ENST00000563221 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
NAE1-210ENST00000563221 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
NAE1-210ENST00000563221 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
NAE1-210ENST00000563221 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
NAE1-210ENST00000563221 POLA2Q14181 598 aa15.78■□□□□ 0.12
NAE1-210ENST00000563221 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
NAE1-210ENST00000563221 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
NAE1-210ENST00000563221 SHROOM4Q9ULL8 1493 aa15.61■□□□□ 0.09
NAE1-210ENST00000563221 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
NAE1-210ENST00000563221 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
NAE1-210ENST00000563221 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
NAE1-210ENST00000563221 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
NAE1-210ENST00000563221 CECR2Q9BXF3 1484 aa15.28■□□□□ 0.04
NAE1-210ENST00000563221 FBLN2P98095 1184 aa15.24■□□□□ 0.03
NAE1-210ENST00000563221 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.03
NAE1-210ENST00000563221 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
NAE1-210ENST00000563221 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
NAE1-210ENST00000563221 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
NAE1-210ENST00000563221 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
NAE1-210ENST00000563221 AKT1S1Q96B36 256 aa15.04■□□□□ -0
NAE1-210ENST00000563221 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
NAE1-210ENST00000563221 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
NAE1-210ENST00000563221 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
NAE1-210ENST00000563221 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
NAE1-210ENST00000563221 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
NAE1-210ENST00000563221 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
NAE1-210ENST00000563221 REM2Q8IYK8 340 aaPredicted RBP14.93□□□□□ -0.02
NAE1-210ENST00000563221 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
NAE1-210ENST00000563221 WIZO95785 1651 aa14.91□□□□□ -0.02
NAE1-210ENST00000563221 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
NAE1-210ENST00000563221 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
NAE1-210ENST00000563221 CHRDL2Q6WN34 429 aa14.88□□□□□ -0.03
NAE1-210ENST00000563221 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
NAE1-210ENST00000563221 POTEHQ6S545 545 aa14.85□□□□□ -0.03
NAE1-210ENST00000563221 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
NAE1-210ENST00000563221 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
NAE1-210ENST00000563221 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
NAE1-210ENST00000563221 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
NAE1-210ENST00000563221 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
NAE1-210ENST00000563221 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
NAE1-210ENST00000563221 NESP48681 1621 aa14.67□□□□□ -0.06
NAE1-210ENST00000563221 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
NAE1-210ENST00000563221 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
NAE1-210ENST00000563221 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
NAE1-210ENST00000563221 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
NAE1-210ENST00000563221 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms