RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
IRF9-208ENST00000560311 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
IRF9-208ENST00000560311 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
IRF9-208ENST00000560311 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
IRF9-208ENST00000560311 FOXD1Q16676 465 aa19.41■□□□□ 0.7
IRF9-208ENST00000560311 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
IRF9-208ENST00000560311 MSH5O43196 834 aa18.26■□□□□ 0.51
IRF9-208ENST00000560311 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
IRF9-208ENST00000560311 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
IRF9-208ENST00000560311 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
IRF9-208ENST00000560311 ADRA2BP18089 450 aa17.75■□□□□ 0.43
IRF9-208ENST00000560311 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
IRF9-208ENST00000560311 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
IRF9-208ENST00000560311 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
IRF9-208ENST00000560311 NISCHQ9Y2I1 1504 aa16.08■□□□□ 0.16
IRF9-208ENST00000560311 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
IRF9-208ENST00000560311 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
IRF9-208ENST00000560311 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
IRF9-208ENST00000560311 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
IRF9-208ENST00000560311 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
IRF9-208ENST00000560311 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
IRF9-208ENST00000560311 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
IRF9-208ENST00000560311 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
IRF9-208ENST00000560311 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
IRF9-208ENST00000560311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
IRF9-208ENST00000560311 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
IRF9-208ENST00000560311 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
IRF9-208ENST00000560311 POTEHQ6S545 545 aa14.52□□□□□ -0.09
IRF9-208ENST00000560311 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
IRF9-208ENST00000560311 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
IRF9-208ENST00000560311 CAPN15O75808 1086 aa14.45□□□□□ -0.1
IRF9-208ENST00000560311 DSG3P32926 999 aa14.44□□□□□ -0.1
IRF9-208ENST00000560311 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
IRF9-208ENST00000560311 ABCC9O60706 1549 aa14.13□□□□□ -0.15
IRF9-208ENST00000560311 ABCB7O75027 752 aa14.12□□□□□ -0.15
IRF9-208ENST00000560311 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
IRF9-208ENST00000560311 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
IRF9-208ENST00000560311 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
IRF9-208ENST00000560311 KCNA4P22459 653 aa13.98□□□□□ -0.17
IRF9-208ENST00000560311 APLP2Q06481 763 aa13.96□□□□□ -0.17
IRF9-208ENST00000560311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
IRF9-208ENST00000560311 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
IRF9-208ENST00000560311 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
IRF9-208ENST00000560311 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
IRF9-208ENST00000560311 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
IRF9-208ENST00000560311 POLA2Q14181 598 aa13.62□□□□□ -0.23
IRF9-208ENST00000560311 RB1CC1Q8TDY2 1594 aa13.56□□□□□ -0.24
IRF9-208ENST00000560311 NACADO15069 1562 aa13.51□□□□□ -0.25
IRF9-208ENST00000560311 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
IRF9-208ENST00000560311 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
IRF9-208ENST00000560311 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
IRF9-208ENST00000560311 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
IRF9-208ENST00000560311 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
IRF9-208ENST00000560311 DCAF8L2P0C7V8 631 aa13.34□□□□□ -0.27
IRF9-208ENST00000560311 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
IRF9-208ENST00000560311 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
IRF9-208ENST00000560311 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
IRF9-208ENST00000560311 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
IRF9-208ENST00000560311 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
IRF9-208ENST00000560311 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
IRF9-208ENST00000560311 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
IRF9-208ENST00000560311 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
IRF9-208ENST00000560311 HAX1O00165 279 aa13.15□□□□□ -0.3
IRF9-208ENST00000560311 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
IRF9-208ENST00000560311 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
IRF9-208ENST00000560311 SCRIBQ14160 1630 aa13.13□□□□□ -0.31
IRF9-208ENST00000560311 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
IRF9-208ENST00000560311 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
IRF9-208ENST00000560311 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
IRF9-208ENST00000560311 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
IRF9-208ENST00000560311 EVX2Q03828 476 aa13□□□□□ -0.33
IRF9-208ENST00000560311 ZBTB22O15209 634 aa12.87□□□□□ -0.35
IRF9-208ENST00000560311 EIF4G1Q04637 1599 aaKnown RBP12.83□□□□□ -0.36
IRF9-208ENST00000560311 SPDYE2BA6NHP3 402 aa12.81□□□□□ -0.36
IRF9-208ENST00000560311 SPDYE6P0CI01 402 aa12.81□□□□□ -0.36
IRF9-208ENST00000560311 SPDYE2Q495Y8 402 aa12.81□□□□□ -0.36
IRF9-208ENST00000560311 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
IRF9-208ENST00000560311 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
IRF9-208ENST00000560311 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
IRF9-208ENST00000560311 FBLN2P98095 1184 aa12.75□□□□□ -0.37
IRF9-208ENST00000560311 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
IRF9-208ENST00000560311 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
IRF9-208ENST00000560311 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
IRF9-208ENST00000560311 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
IRF9-208ENST00000560311 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
IRF9-208ENST00000560311 GABBR2O75899 941 aa12.63□□□□□ -0.39
IRF9-208ENST00000560311 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
IRF9-208ENST00000560311 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
IRF9-208ENST00000560311 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
IRF9-208ENST00000560311 LHX8Q68G74 356 aa12.57□□□□□ -0.4
IRF9-208ENST00000560311 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
IRF9-208ENST00000560311 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
IRF9-208ENST00000560311 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
IRF9-208ENST00000560311 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.42
IRF9-208ENST00000560311 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
IRF9-208ENST00000560311 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
IRF9-208ENST00000560311 HMGXB3Q12766 1538 aa12.43□□□□□ -0.42
IRF9-208ENST00000560311 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.42
IRF9-208ENST00000560311 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
IRF9-208ENST00000560311 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms