RNA–Protein interactions for RNA: ENST00000558660.1

MRPL46-203, Transcript of mitochondrial ribosomal protein L46, humanhuman

TSL 2

Gene MRPL46, Length 5,561 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL46-203ENST00000558660 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
MRPL46-203ENST00000558660 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
MRPL46-203ENST00000558660 MYT1Q01538 1121 aa14.6□□□□□ -0.07
MRPL46-203ENST00000558660 SUPT5HO00267 1087 aaKnown RBP14.4□□□□□ -0.1
MRPL46-203ENST00000558660 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
MRPL46-203ENST00000558660 PCGF6Q9BYE7 350 aa14.22□□□□□ -0.13
MRPL46-203ENST00000558660 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
MRPL46-203ENST00000558660 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
MRPL46-203ENST00000558660 HRCP23327 699 aa14.17□□□□□ -0.14
MRPL46-203ENST00000558660 CENPBP07199 599 aaPredicted RBP14.09□□□□□ -0.15
MRPL46-203ENST00000558660 CCDC180Q9P1Z9 1646 aa13.95□□□□□ -0.18
MRPL46-203ENST00000558660 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
MRPL46-203ENST00000558660 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
MRPL46-203ENST00000558660 PPARGC1BQ86YN6 1023 aaKnown RBP13.67□□□□□ -0.22
MRPL46-203ENST00000558660 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
MRPL46-203ENST00000558660 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
MRPL46-203ENST00000558660 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
MRPL46-203ENST00000558660 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
MRPL46-203ENST00000558660 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
MRPL46-203ENST00000558660 DCAF1Q9Y4B6 1507 aa13.53□□□□□ -0.24
MRPL46-203ENST00000558660 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
MRPL46-203ENST00000558660 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
MRPL46-203ENST00000558660 APLP2Q06481 763 aa13.44□□□□□ -0.26
MRPL46-203ENST00000558660 TTBK1Q5TCY1 1321 aaPredicted RBP13.43□□□□□ -0.26
MRPL46-203ENST00000558660 NEFLP07196 543 aa13.39□□□□□ -0.27
MRPL46-203ENST00000558660 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
MRPL46-203ENST00000558660 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
MRPL46-203ENST00000558660 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
MRPL46-203ENST00000558660 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
MRPL46-203ENST00000558660 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
MRPL46-203ENST00000558660 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
MRPL46-203ENST00000558660 NACADO15069 1562 aa13.1□□□□□ -0.31
MRPL46-203ENST00000558660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
MRPL46-203ENST00000558660 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
MRPL46-203ENST00000558660 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
MRPL46-203ENST00000558660 SCRIBQ14160 1630 aa13.02□□□□□ -0.33
MRPL46-203ENST00000558660 ABCC9O60706 1549 aa13□□□□□ -0.33
MRPL46-203ENST00000558660 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
MRPL46-203ENST00000558660 RB1CC1Q8TDY2 1594 aa12.99□□□□□ -0.33
MRPL46-203ENST00000558660 NEUROD1Q13562 356 aa12.97□□□□□ -0.33
MRPL46-203ENST00000558660 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
MRPL46-203ENST00000558660 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
MRPL46-203ENST00000558660 EEA1Q15075 1411 aa12.93□□□□□ -0.34
MRPL46-203ENST00000558660 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
MRPL46-203ENST00000558660 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
MRPL46-203ENST00000558660 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
MRPL46-203ENST00000558660 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
MRPL46-203ENST00000558660 BCANQ96GW7 911 aa12.8□□□□□ -0.36
MRPL46-203ENST00000558660 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
MRPL46-203ENST00000558660 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
MRPL46-203ENST00000558660 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.37
MRPL46-203ENST00000558660 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
MRPL46-203ENST00000558660 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
MRPL46-203ENST00000558660 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
MRPL46-203ENST00000558660 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
MRPL46-203ENST00000558660 ANP32CO43423 234 aa12.63□□□□□ -0.39
MRPL46-203ENST00000558660 FKBP8Q14318 412 aa12.6□□□□□ -0.39
MRPL46-203ENST00000558660 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
MRPL46-203ENST00000558660 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
MRPL46-203ENST00000558660 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
MRPL46-203ENST00000558660 ANP32AP39687 249 aaKnown RBP12.57□□□□□ -0.4
MRPL46-203ENST00000558660 ITGAEP38570 1179 aa12.57□□□□□ -0.4
MRPL46-203ENST00000558660 MIER1Q8N108 512 aa12.56□□□□□ -0.4
MRPL46-203ENST00000558660 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
MRPL46-203ENST00000558660 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
MRPL46-203ENST00000558660 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
MRPL46-203ENST00000558660 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
MRPL46-203ENST00000558660 CLIP1P30622 1438 aa12.48□□□□□ -0.41
MRPL46-203ENST00000558660 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
MRPL46-203ENST00000558660 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
MRPL46-203ENST00000558660 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
MRPL46-203ENST00000558660 SMARCA2P51531 1590 aa12.44□□□□□ -0.42
MRPL46-203ENST00000558660 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
MRPL46-203ENST00000558660 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
MRPL46-203ENST00000558660 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
MRPL46-203ENST00000558660 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
MRPL46-203ENST00000558660 WIZO95785 1651 aa12.39□□□□□ -0.43
MRPL46-203ENST00000558660 NBR1Q14596 966 aa12.37□□□□□ -0.43
MRPL46-203ENST00000558660 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
MRPL46-203ENST00000558660 KIF27Q86VH2 1401 aa12.35□□□□□ -0.43
MRPL46-203ENST00000558660 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
MRPL46-203ENST00000558660 FAM50AQ14320 339 aaKnown RBP12.34□□□□□ -0.43
MRPL46-203ENST00000558660 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
MRPL46-203ENST00000558660 NPM2Q86SE8 214 aaKnown RBP12.3□□□□□ -0.44
MRPL46-203ENST00000558660 HNRNPUQ00839 825 aaKnown RBP eCLIP12.28□□□□□ -0.44
MRPL46-203ENST00000558660 TIMELESSQ9UNS1 1208 aa12.27□□□□□ -0.44
MRPL46-203ENST00000558660 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.45
MRPL46-203ENST00000558660 DDX10Q13206 875 aaKnown RBP12.25□□□□□ -0.45
MRPL46-203ENST00000558660 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
MRPL46-203ENST00000558660 SOGA1O94964 1423 aa12.24□□□□□ -0.45
MRPL46-203ENST00000558660 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
MRPL46-203ENST00000558660 DEKP35659 375 aaKnown RBP12.22□□□□□ -0.45
MRPL46-203ENST00000558660 TRIM52Q96A61 297 aa12.22□□□□□ -0.45
MRPL46-203ENST00000558660 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
MRPL46-203ENST00000558660 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
MRPL46-203ENST00000558660 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
MRPL46-203ENST00000558660 KIF21BO75037 1637 aa12.21□□□□□ -0.46
MRPL46-203ENST00000558660 TONSLQ96HA7 1378 aa12.19□□□□□ -0.46
MRPL46-203ENST00000558660 DDRGK1Q96HY6 314 aa12.19□□□□□ -0.46
MRPL46-203ENST00000558660 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms