RNA–Protein interactions for RNA: ENST00000557184.1

CGRRF1-205, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 2

Gene CGRRF1, Length 616 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-205ENST00000557184 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
CGRRF1-205ENST00000557184 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
CGRRF1-205ENST00000557184 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
CGRRF1-205ENST00000557184 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
CGRRF1-205ENST00000557184 FOXD1Q16676 465 aa20.69■□□□□ 0.9
CGRRF1-205ENST00000557184 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
CGRRF1-205ENST00000557184 MSH5O43196 834 aa19.51■□□□□ 0.71
CGRRF1-205ENST00000557184 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
CGRRF1-205ENST00000557184 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
CGRRF1-205ENST00000557184 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.64
CGRRF1-205ENST00000557184 ADRA2BP18089 450 aa18.9■□□□□ 0.62
CGRRF1-205ENST00000557184 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
CGRRF1-205ENST00000557184 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
CGRRF1-205ENST00000557184 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
CGRRF1-205ENST00000557184 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
CGRRF1-205ENST00000557184 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
CGRRF1-205ENST00000557184 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
CGRRF1-205ENST00000557184 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
CGRRF1-205ENST00000557184 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
CGRRF1-205ENST00000557184 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
CGRRF1-205ENST00000557184 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
CGRRF1-205ENST00000557184 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
CGRRF1-205ENST00000557184 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
CGRRF1-205ENST00000557184 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
CGRRF1-205ENST00000557184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.12
CGRRF1-205ENST00000557184 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
CGRRF1-205ENST00000557184 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
CGRRF1-205ENST00000557184 DSG3P32926 999 aa15.42■□□□□ 0.06
CGRRF1-205ENST00000557184 POTEHQ6S545 545 aa15.42■□□□□ 0.06
CGRRF1-205ENST00000557184 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
CGRRF1-205ENST00000557184 CAPN15O75808 1086 aa15.35■□□□□ 0.05
CGRRF1-205ENST00000557184 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
CGRRF1-205ENST00000557184 NISCHQ9Y2I1 1504 aa15□□□□□ -0.01
CGRRF1-205ENST00000557184 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
CGRRF1-205ENST00000557184 KCNA4P22459 653 aa14.98□□□□□ -0.01
CGRRF1-205ENST00000557184 ZNF219Q9P2Y4 722 aaPredicted RBP14.98□□□□□ -0.01
CGRRF1-205ENST00000557184 ABCB7O75027 752 aa14.97□□□□□ -0.01
CGRRF1-205ENST00000557184 APLP2Q06481 763 aa14.96□□□□□ -0.01
CGRRF1-205ENST00000557184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
CGRRF1-205ENST00000557184 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
CGRRF1-205ENST00000557184 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.05
CGRRF1-205ENST00000557184 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
CGRRF1-205ENST00000557184 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
CGRRF1-205ENST00000557184 POLA2Q14181 598 aa14.51□□□□□ -0.09
CGRRF1-205ENST00000557184 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
CGRRF1-205ENST00000557184 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
CGRRF1-205ENST00000557184 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
CGRRF1-205ENST00000557184 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
CGRRF1-205ENST00000557184 ABCC9O60706 1549 aa14.21□□□□□ -0.13
CGRRF1-205ENST00000557184 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
CGRRF1-205ENST00000557184 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
CGRRF1-205ENST00000557184 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
CGRRF1-205ENST00000557184 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
CGRRF1-205ENST00000557184 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
CGRRF1-205ENST00000557184 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
CGRRF1-205ENST00000557184 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
CGRRF1-205ENST00000557184 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
CGRRF1-205ENST00000557184 HAX1O00165 279 aa13.93□□□□□ -0.18
CGRRF1-205ENST00000557184 ZBTB22O15209 634 aa13.81□□□□□ -0.2
CGRRF1-205ENST00000557184 EVX2Q03828 476 aa13.8□□□□□ -0.2
CGRRF1-205ENST00000557184 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
CGRRF1-205ENST00000557184 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
CGRRF1-205ENST00000557184 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
CGRRF1-205ENST00000557184 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
CGRRF1-205ENST00000557184 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
CGRRF1-205ENST00000557184 FBLN2P98095 1184 aa13.63□□□□□ -0.23
CGRRF1-205ENST00000557184 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
CGRRF1-205ENST00000557184 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
CGRRF1-205ENST00000557184 C19orf67A6NJJ6 358 aa13.56□□□□□ -0.24
CGRRF1-205ENST00000557184 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
CGRRF1-205ENST00000557184 CLEC11AQ9Y240 323 aa13.54□□□□□ -0.24
CGRRF1-205ENST00000557184 SSUH2Q9Y2M2 353 aa13.53□□□□□ -0.24
CGRRF1-205ENST00000557184 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
CGRRF1-205ENST00000557184 GABBR2O75899 941 aa13.44□□□□□ -0.26
CGRRF1-205ENST00000557184 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
CGRRF1-205ENST00000557184 LHX8Q68G74 356 aa13.34□□□□□ -0.27
CGRRF1-205ENST00000557184 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
CGRRF1-205ENST00000557184 PRR29P0C7W0 189 aa13.27□□□□□ -0.29
CGRRF1-205ENST00000557184 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
CGRRF1-205ENST00000557184 POTEIP0CG38 1075 aa13.19□□□□□ -0.3
CGRRF1-205ENST00000557184 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
CGRRF1-205ENST00000557184 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
CGRRF1-205ENST00000557184 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
CGRRF1-205ENST00000557184 NACADO15069 1562 aa13.08□□□□□ -0.32
CGRRF1-205ENST00000557184 CLCN6P51797 869 aa13.07□□□□□ -0.32
CGRRF1-205ENST00000557184 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
CGRRF1-205ENST00000557184 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
CGRRF1-205ENST00000557184 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
CGRRF1-205ENST00000557184 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
CGRRF1-205ENST00000557184 CREBZFQ9NS37 354 aa12.89□□□□□ -0.35
CGRRF1-205ENST00000557184 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
CGRRF1-205ENST00000557184 CECR2Q9BXF3 1484 aa12.88□□□□□ -0.35
CGRRF1-205ENST00000557184 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
CGRRF1-205ENST00000557184 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
CGRRF1-205ENST00000557184 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
CGRRF1-205ENST00000557184 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
CGRRF1-205ENST00000557184 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
CGRRF1-205ENST00000557184 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
CGRRF1-205ENST00000557184 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
CGRRF1-205ENST00000557184 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms