RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
PCNX1-211ENST00000556272 NISCHQ9Y2I1 1504 aa15.14■□□□□ 0.01
PCNX1-211ENST00000556272 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
PCNX1-211ENST00000556272 AEBP2Q6ZN18 517 aaPredicted RBP14.61□□□□□ -0.07
PCNX1-211ENST00000556272 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
PCNX1-211ENST00000556272 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
PCNX1-211ENST00000556272 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
PCNX1-211ENST00000556272 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.21
PCNX1-211ENST00000556272 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
PCNX1-211ENST00000556272 KCNA4P22459 653 aa13.43□□□□□ -0.26
PCNX1-211ENST00000556272 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
PCNX1-211ENST00000556272 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.28
PCNX1-211ENST00000556272 DAXXQ9UER7 740 aaPredicted RBP13.19□□□□□ -0.3
PCNX1-211ENST00000556272 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
PCNX1-211ENST00000556272 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
PCNX1-211ENST00000556272 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
PCNX1-211ENST00000556272 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
PCNX1-211ENST00000556272 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
PCNX1-211ENST00000556272 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
PCNX1-211ENST00000556272 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.39
PCNX1-211ENST00000556272 ADRA2BP18089 450 aa12.58□□□□□ -0.4
PCNX1-211ENST00000556272 ARXQ96QS3 562 aa12.57□□□□□ -0.4
PCNX1-211ENST00000556272 SHROOM4Q9ULL8 1493 aa12.54□□□□□ -0.4
PCNX1-211ENST00000556272 ZBTB22O15209 634 aa12.48□□□□□ -0.41
PCNX1-211ENST00000556272 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
PCNX1-211ENST00000556272 ABCC9O60706 1549 aa12.4□□□□□ -0.42
PCNX1-211ENST00000556272 BCANQ96GW7 911 aa12.38□□□□□ -0.43
PCNX1-211ENST00000556272 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
PCNX1-211ENST00000556272 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
PCNX1-211ENST00000556272 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
PCNX1-211ENST00000556272 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
PCNX1-211ENST00000556272 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
PCNX1-211ENST00000556272 HOMEZQ8IX15 550 aa12.18□□□□□ -0.46
PCNX1-211ENST00000556272 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
PCNX1-211ENST00000556272 APLP2Q06481 763 aa12.17□□□□□ -0.46
PCNX1-211ENST00000556272 NACADO15069 1562 aa12.14□□□□□ -0.47
PCNX1-211ENST00000556272 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
PCNX1-211ENST00000556272 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
PCNX1-211ENST00000556272 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.48
PCNX1-211ENST00000556272 FKBP8Q14318 412 aa12.01□□□□□ -0.49
PCNX1-211ENST00000556272 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
PCNX1-211ENST00000556272 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
PCNX1-211ENST00000556272 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
PCNX1-211ENST00000556272 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
PCNX1-211ENST00000556272 RSF1Q96T23 1441 aaPredicted RBP11.91□□□□□ -0.5
PCNX1-211ENST00000556272 PPP6R1Q9UPN7 881 aa11.9□□□□□ -0.5
PCNX1-211ENST00000556272 UNC13AQ9UPW8 1703 aa11.88□□□□□ -0.51
PCNX1-211ENST00000556272 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
PCNX1-211ENST00000556272 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
PCNX1-211ENST00000556272 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
PCNX1-211ENST00000556272 HRCP23327 699 aa11.84□□□□□ -0.51
PCNX1-211ENST00000556272 TTBK1Q5TCY1 1321 aaPredicted RBP11.83□□□□□ -0.52
PCNX1-211ENST00000556272 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
PCNX1-211ENST00000556272 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
PCNX1-211ENST00000556272 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
PCNX1-211ENST00000556272 ERICH6Q7L0X2 663 aa11.79□□□□□ -0.52
PCNX1-211ENST00000556272 FBLN2P98095 1184 aa11.77□□□□□ -0.52
PCNX1-211ENST00000556272 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
PCNX1-211ENST00000556272 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.54
PCNX1-211ENST00000556272 BAZ1AQ9NRL2 1556 aaPredicted RBP11.7□□□□□ -0.54
PCNX1-211ENST00000556272 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
PCNX1-211ENST00000556272 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
PCNX1-211ENST00000556272 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
PCNX1-211ENST00000556272 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
PCNX1-211ENST00000556272 CECR2Q9BXF3 1484 aa11.65□□□□□ -0.54
PCNX1-211ENST00000556272 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
PCNX1-211ENST00000556272 NPM2Q86SE8 214 aaKnown RBP11.63□□□□□ -0.55
PCNX1-211ENST00000556272 TRIM26Q12899 539 aaPredicted RBP11.63□□□□□ -0.55
PCNX1-211ENST00000556272 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
PCNX1-211ENST00000556272 WIZO95785 1651 aa11.62□□□□□ -0.55
PCNX1-211ENST00000556272 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
PCNX1-211ENST00000556272 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
PCNX1-211ENST00000556272 MYT1Q01538 1121 aa11.59□□□□□ -0.55
PCNX1-211ENST00000556272 DNAJC5Q9H3Z4 198 aa11.58□□□□□ -0.56
PCNX1-211ENST00000556272 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
PCNX1-211ENST00000556272 SMARCA4P51532 1647 aa11.54□□□□□ -0.56
PCNX1-211ENST00000556272 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
PCNX1-211ENST00000556272 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
PCNX1-211ENST00000556272 SMARCA2P51531 1590 aa11.45□□□□□ -0.58
PCNX1-211ENST00000556272 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
PCNX1-211ENST00000556272 EEA1Q15075 1411 aa11.4□□□□□ -0.59
PCNX1-211ENST00000556272 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
PCNX1-211ENST00000556272 CCDC88BA6NC98 1476 aa11.39□□□□□ -0.59
PCNX1-211ENST00000556272 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
PCNX1-211ENST00000556272 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
PCNX1-211ENST00000556272 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
PCNX1-211ENST00000556272 FAM9AQ8IZU1 332 aaPredicted RBP11.31□□□□□ -0.6
PCNX1-211ENST00000556272 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
PCNX1-211ENST00000556272 ABCC8Q09428 1581 aa11.3□□□□□ -0.6
PCNX1-211ENST00000556272 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
PCNX1-211ENST00000556272 TNIKQ9UKE5 1360 aa11.27□□□□□ -0.6
PCNX1-211ENST00000556272 CFAP44Q96MT7 982 aa11.27□□□□□ -0.6
PCNX1-211ENST00000556272 ATAD2BQ9ULI0 1458 aa11.27□□□□□ -0.61
PCNX1-211ENST00000556272 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
PCNX1-211ENST00000556272 CC2D2AQ9P2K1 1620 aa11.24□□□□□ -0.61
PCNX1-211ENST00000556272 PKD2Q13563 968 aa11.23□□□□□ -0.61
PCNX1-211ENST00000556272 KIF21BO75037 1637 aa11.22□□□□□ -0.61
PCNX1-211ENST00000556272 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
PCNX1-211ENST00000556272 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
PCNX1-211ENST00000556272 NBR1Q14596 966 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms