RNA–Protein interactions for RNA: ENST00000556123.1

PLEKHD1-202, Transcript of pleckstrin homology and coiled-coil domain containing D1, humanhuman

TSL 2

Gene PLEKHD1, Length 3,999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1-202ENST00000556123 NISCHQ9Y2I1 1504 aa20.48■□□□□ 0.87
PLEKHD1-202ENST00000556123 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
PLEKHD1-202ENST00000556123 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
PLEKHD1-202ENST00000556123 SUPT5HO00267 1087 aaKnown RBP18.76■□□□□ 0.59
PLEKHD1-202ENST00000556123 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
PLEKHD1-202ENST00000556123 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.44
PLEKHD1-202ENST00000556123 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
PLEKHD1-202ENST00000556123 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
PLEKHD1-202ENST00000556123 MYT1Q01538 1121 aa17.37■□□□□ 0.37
PLEKHD1-202ENST00000556123 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
PLEKHD1-202ENST00000556123 HRCP23327 699 aa17.31■□□□□ 0.36
PLEKHD1-202ENST00000556123 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
PLEKHD1-202ENST00000556123 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
PLEKHD1-202ENST00000556123 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
PLEKHD1-202ENST00000556123 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
PLEKHD1-202ENST00000556123 RANGAP1P46060 587 aaPredicted RBP17.13■□□□□ 0.33
PLEKHD1-202ENST00000556123 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
PLEKHD1-202ENST00000556123 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
PLEKHD1-202ENST00000556123 ABCC9O60706 1549 aa16.94■□□□□ 0.3
PLEKHD1-202ENST00000556123 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
PLEKHD1-202ENST00000556123 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
PLEKHD1-202ENST00000556123 APLP2Q06481 763 aa16.76■□□□□ 0.27
PLEKHD1-202ENST00000556123 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
PLEKHD1-202ENST00000556123 CCER1Q8TC90 406 aaPredicted RBP16.62■□□□□ 0.25
PLEKHD1-202ENST00000556123 ATP1B4Q9UN42 357 aaPredicted RBP16.61■□□□□ 0.25
PLEKHD1-202ENST00000556123 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
PLEKHD1-202ENST00000556123 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.23
PLEKHD1-202ENST00000556123 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
PLEKHD1-202ENST00000556123 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
PLEKHD1-202ENST00000556123 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
PLEKHD1-202ENST00000556123 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
PLEKHD1-202ENST00000556123 ITGAEP38570 1179 aa16.34■□□□□ 0.21
PLEKHD1-202ENST00000556123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
PLEKHD1-202ENST00000556123 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
PLEKHD1-202ENST00000556123 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
PLEKHD1-202ENST00000556123 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
PLEKHD1-202ENST00000556123 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
PLEKHD1-202ENST00000556123 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
PLEKHD1-202ENST00000556123 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
PLEKHD1-202ENST00000556123 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
PLEKHD1-202ENST00000556123 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
PLEKHD1-202ENST00000556123 NACADO15069 1562 aa16.12■□□□□ 0.17
PLEKHD1-202ENST00000556123 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
PLEKHD1-202ENST00000556123 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
PLEKHD1-202ENST00000556123 SLC24A1O60721 1099 aa16■□□□□ 0.15
PLEKHD1-202ENST00000556123 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
PLEKHD1-202ENST00000556123 WIZO95785 1651 aa15.94■□□□□ 0.14
PLEKHD1-202ENST00000556123 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
PLEKHD1-202ENST00000556123 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
PLEKHD1-202ENST00000556123 PRKCSHP14314 528 aaPredicted RBP15.85■□□□□ 0.13
PLEKHD1-202ENST00000556123 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
PLEKHD1-202ENST00000556123 ARID3CA6NKF2 412 aa15.83■□□□□ 0.13
PLEKHD1-202ENST00000556123 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.13
PLEKHD1-202ENST00000556123 ERICH6Q7L0X2 663 aa15.77■□□□□ 0.11
PLEKHD1-202ENST00000556123 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
PLEKHD1-202ENST00000556123 POLR3GLQ9BT43 218 aa15.73■□□□□ 0.11
PLEKHD1-202ENST00000556123 ANP32EQ9BTT0 268 aa15.71■□□□□ 0.11
PLEKHD1-202ENST00000556123 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
PLEKHD1-202ENST00000556123 FBLN2P98095 1184 aa15.7■□□□□ 0.1
PLEKHD1-202ENST00000556123 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
PLEKHD1-202ENST00000556123 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
PLEKHD1-202ENST00000556123 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
PLEKHD1-202ENST00000556123 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
PLEKHD1-202ENST00000556123 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.09
PLEKHD1-202ENST00000556123 TRIM52Q96A61 297 aa15.57■□□□□ 0.08
PLEKHD1-202ENST00000556123 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
PLEKHD1-202ENST00000556123 SOGA1O94964 1423 aa15.5■□□□□ 0.07
PLEKHD1-202ENST00000556123 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
PLEKHD1-202ENST00000556123 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
PLEKHD1-202ENST00000556123 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
PLEKHD1-202ENST00000556123 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
PLEKHD1-202ENST00000556123 NEFLP07196 543 aa15.45■□□□□ 0.06
PLEKHD1-202ENST00000556123 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
PLEKHD1-202ENST00000556123 CLIP1P30622 1438 aa15.43■□□□□ 0.06
PLEKHD1-202ENST00000556123 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
PLEKHD1-202ENST00000556123 RUSC2Q8N2Y8 1516 aa15.41■□□□□ 0.06
PLEKHD1-202ENST00000556123 ZNF777Q9ULD5 760 aaPredicted RBP15.4■□□□□ 0.06
PLEKHD1-202ENST00000556123 BCANQ96GW7 911 aa15.39■□□□□ 0.05
PLEKHD1-202ENST00000556123 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
PLEKHD1-202ENST00000556123 CHIC2Q9UKJ5 165 aa15.38■□□□□ 0.05
PLEKHD1-202ENST00000556123 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
PLEKHD1-202ENST00000556123 EIF4G1Q04637 1599 aaKnown RBP15.33■□□□□ 0.05
PLEKHD1-202ENST00000556123 GOLGA3Q08378 1498 aa15.29■□□□□ 0.04
PLEKHD1-202ENST00000556123 TNIKQ9UKE5 1360 aa15.27■□□□□ 0.03
PLEKHD1-202ENST00000556123 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
PLEKHD1-202ENST00000556123 TSHZ2Q9NRE2 1034 aa15.25■□□□□ 0.03
PLEKHD1-202ENST00000556123 MIER1Q8N108 512 aa15.25■□□□□ 0.03
PLEKHD1-202ENST00000556123 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
PLEKHD1-202ENST00000556123 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
PLEKHD1-202ENST00000556123 KANK4Q5T7N3 995 aaPredicted RBP15.18■□□□□ 0.02
PLEKHD1-202ENST00000556123 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
PLEKHD1-202ENST00000556123 EEA1Q15075 1411 aa15.18■□□□□ 0.02
PLEKHD1-202ENST00000556123 ANP32CO43423 234 aa15.17■□□□□ 0.02
PLEKHD1-202ENST00000556123 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
PLEKHD1-202ENST00000556123 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
PLEKHD1-202ENST00000556123 ANO8Q9HCE9 1232 aaPredicted RBP15.15■□□□□ 0.02
PLEKHD1-202ENST00000556123 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
PLEKHD1-202ENST00000556123 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
PLEKHD1-202ENST00000556123 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
PLEKHD1-202ENST00000556123 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms