RNA–Protein interactions for RNA: ENST00000555782.1

RAD51B-221, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-221ENST00000555782 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
RAD51B-221ENST00000555782 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
RAD51B-221ENST00000555782 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
RAD51B-221ENST00000555782 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
RAD51B-221ENST00000555782 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
RAD51B-221ENST00000555782 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
RAD51B-221ENST00000555782 FOXD1Q16676 465 aa17.51■□□□□ 0.39
RAD51B-221ENST00000555782 ADRA2BP18089 450 aa17.42■□□□□ 0.38
RAD51B-221ENST00000555782 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
RAD51B-221ENST00000555782 KCNA4P22459 653 aa17.21■□□□□ 0.35
RAD51B-221ENST00000555782 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
RAD51B-221ENST00000555782 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
RAD51B-221ENST00000555782 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
RAD51B-221ENST00000555782 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
RAD51B-221ENST00000555782 NISCHQ9Y2I1 1504 aa16.55■□□□□ 0.24
RAD51B-221ENST00000555782 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
RAD51B-221ENST00000555782 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
RAD51B-221ENST00000555782 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
RAD51B-221ENST00000555782 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
RAD51B-221ENST00000555782 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.16
RAD51B-221ENST00000555782 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
RAD51B-221ENST00000555782 MSH5O43196 834 aa15.84■□□□□ 0.13
RAD51B-221ENST00000555782 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
RAD51B-221ENST00000555782 ZBTB22O15209 634 aa15.8■□□□□ 0.12
RAD51B-221ENST00000555782 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
RAD51B-221ENST00000555782 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
RAD51B-221ENST00000555782 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
RAD51B-221ENST00000555782 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
RAD51B-221ENST00000555782 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
RAD51B-221ENST00000555782 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
RAD51B-221ENST00000555782 FKBP8Q14318 412 aa15.16■□□□□ 0.02
RAD51B-221ENST00000555782 ABCC9O60706 1549 aa15.1■□□□□ 0.01
RAD51B-221ENST00000555782 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
RAD51B-221ENST00000555782 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
RAD51B-221ENST00000555782 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
RAD51B-221ENST00000555782 PLCB2Q00722 1185 aa14.81□□□□□ -0.04
RAD51B-221ENST00000555782 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
RAD51B-221ENST00000555782 BCANQ96GW7 911 aa14.74□□□□□ -0.05
RAD51B-221ENST00000555782 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
RAD51B-221ENST00000555782 TAOK2Q9UL54 1235 aa14.56□□□□□ -0.08
RAD51B-221ENST00000555782 PRKCSHP14314 528 aaPredicted RBP14.54□□□□□ -0.08
RAD51B-221ENST00000555782 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
RAD51B-221ENST00000555782 DCAF8L1A6NGE4 600 aa14.41□□□□□ -0.1
RAD51B-221ENST00000555782 FBXO3Q9UK99 471 aa14.4□□□□□ -0.1
RAD51B-221ENST00000555782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.11
RAD51B-221ENST00000555782 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
RAD51B-221ENST00000555782 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
RAD51B-221ENST00000555782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.28□□□□□ -0.12
RAD51B-221ENST00000555782 HNRNPUL2Q1KMD3 747 aaKnown RBP14.28□□□□□ -0.12
RAD51B-221ENST00000555782 TPRNQ4KMQ1 711 aa14.28□□□□□ -0.12
RAD51B-221ENST00000555782 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
RAD51B-221ENST00000555782 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
RAD51B-221ENST00000555782 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
RAD51B-221ENST00000555782 NACADO15069 1562 aa14.12□□□□□ -0.15
RAD51B-221ENST00000555782 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
RAD51B-221ENST00000555782 DAXXQ9UER7 740 aaPredicted RBP14.07□□□□□ -0.16
RAD51B-221ENST00000555782 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
RAD51B-221ENST00000555782 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
RAD51B-221ENST00000555782 KDM2AQ9Y2K7 1162 aa14.02□□□□□ -0.17
RAD51B-221ENST00000555782 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
RAD51B-221ENST00000555782 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
RAD51B-221ENST00000555782 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
RAD51B-221ENST00000555782 ARXQ96QS3 562 aa14□□□□□ -0.17
RAD51B-221ENST00000555782 PKD2Q13563 968 aa13.96□□□□□ -0.17
RAD51B-221ENST00000555782 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
RAD51B-221ENST00000555782 APLP2Q06481 763 aa13.95□□□□□ -0.18
RAD51B-221ENST00000555782 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
RAD51B-221ENST00000555782 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
RAD51B-221ENST00000555782 TIMELESSQ9UNS1 1208 aa13.91□□□□□ -0.18
RAD51B-221ENST00000555782 FBLN2P98095 1184 aa13.9□□□□□ -0.18
RAD51B-221ENST00000555782 PROM2Q8N271 834 aa13.9□□□□□ -0.18
RAD51B-221ENST00000555782 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
RAD51B-221ENST00000555782 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
RAD51B-221ENST00000555782 MYO15BQ96JP2 1530 aa13.88□□□□□ -0.19
RAD51B-221ENST00000555782 TULP1O00294 542 aaPredicted RBP13.86□□□□□ -0.19
RAD51B-221ENST00000555782 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
RAD51B-221ENST00000555782 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
RAD51B-221ENST00000555782 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
RAD51B-221ENST00000555782 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
RAD51B-221ENST00000555782 NBR1Q14596 966 aa13.74□□□□□ -0.21
RAD51B-221ENST00000555782 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.21
RAD51B-221ENST00000555782 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
RAD51B-221ENST00000555782 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
RAD51B-221ENST00000555782 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
RAD51B-221ENST00000555782 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
RAD51B-221ENST00000555782 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
RAD51B-221ENST00000555782 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
RAD51B-221ENST00000555782 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
RAD51B-221ENST00000555782 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
RAD51B-221ENST00000555782 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
RAD51B-221ENST00000555782 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
RAD51B-221ENST00000555782 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
RAD51B-221ENST00000555782 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
RAD51B-221ENST00000555782 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
RAD51B-221ENST00000555782 POLA2Q14181 598 aa13.59□□□□□ -0.23
RAD51B-221ENST00000555782 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
RAD51B-221ENST00000555782 TMEM132AQ24JP5 1023 aa13.55□□□□□ -0.24
RAD51B-221ENST00000555782 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
RAD51B-221ENST00000555782 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
RAD51B-221ENST00000555782 CAPN15O75808 1086 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms