RNA–Protein interactions for RNA: ENST00000555679.5

PSMC1-205, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 606 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-205ENST00000555679 AEBP2Q6ZN18 517 aaPredicted RBP28.2■■■□□ 2.1
PSMC1-205ENST00000555679 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
PSMC1-205ENST00000555679 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
PSMC1-205ENST00000555679 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
PSMC1-205ENST00000555679 FOXD1Q16676 465 aa22.31■■□□□ 1.16
PSMC1-205ENST00000555679 PLPPR3Q6T4P5 718 aa21.56■■□□□ 1.04
PSMC1-205ENST00000555679 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
PSMC1-205ENST00000555679 ADRA2BP18089 450 aa21.03■□□□□ 0.96
PSMC1-205ENST00000555679 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
PSMC1-205ENST00000555679 MSH5O43196 834 aa20.66■□□□□ 0.9
PSMC1-205ENST00000555679 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
PSMC1-205ENST00000555679 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
PSMC1-205ENST00000555679 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
PSMC1-205ENST00000555679 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
PSMC1-205ENST00000555679 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
PSMC1-205ENST00000555679 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
PSMC1-205ENST00000555679 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
PSMC1-205ENST00000555679 HOXD11P31277 338 aaPredicted RBP18.41■□□□□ 0.54
PSMC1-205ENST00000555679 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
PSMC1-205ENST00000555679 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
PSMC1-205ENST00000555679 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
PSMC1-205ENST00000555679 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
PSMC1-205ENST00000555679 KCNA4P22459 653 aa17.99■□□□□ 0.47
PSMC1-205ENST00000555679 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
PSMC1-205ENST00000555679 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
PSMC1-205ENST00000555679 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
PSMC1-205ENST00000555679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
PSMC1-205ENST00000555679 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
PSMC1-205ENST00000555679 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
PSMC1-205ENST00000555679 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
PSMC1-205ENST00000555679 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
PSMC1-205ENST00000555679 ABCC9O60706 1549 aa16.96■□□□□ 0.3
PSMC1-205ENST00000555679 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
PSMC1-205ENST00000555679 CAPN15O75808 1086 aa16.8■□□□□ 0.28
PSMC1-205ENST00000555679 CCDC180Q9P1Z9 1646 aa16.77■□□□□ 0.27
PSMC1-205ENST00000555679 DSG3P32926 999 aa16.7■□□□□ 0.26
PSMC1-205ENST00000555679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
PSMC1-205ENST00000555679 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
PSMC1-205ENST00000555679 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
PSMC1-205ENST00000555679 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
PSMC1-205ENST00000555679 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
PSMC1-205ENST00000555679 ZBTB22O15209 634 aa16.61■□□□□ 0.25
PSMC1-205ENST00000555679 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
PSMC1-205ENST00000555679 APLP2Q06481 763 aa16.57■□□□□ 0.24
PSMC1-205ENST00000555679 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
PSMC1-205ENST00000555679 ABCB7O75027 752 aa16.49■□□□□ 0.23
PSMC1-205ENST00000555679 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
PSMC1-205ENST00000555679 POLA2Q14181 598 aa16.24■□□□□ 0.19
PSMC1-205ENST00000555679 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
PSMC1-205ENST00000555679 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
PSMC1-205ENST00000555679 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
PSMC1-205ENST00000555679 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
PSMC1-205ENST00000555679 NACADO15069 1562 aa15.9■□□□□ 0.14
PSMC1-205ENST00000555679 ZBTB12Q9Y330 459 aaPredicted RBP15.8■□□□□ 0.12
PSMC1-205ENST00000555679 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
PSMC1-205ENST00000555679 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
PSMC1-205ENST00000555679 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
PSMC1-205ENST00000555679 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
PSMC1-205ENST00000555679 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
PSMC1-205ENST00000555679 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
PSMC1-205ENST00000555679 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
PSMC1-205ENST00000555679 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
PSMC1-205ENST00000555679 POTEHQ6S545 545 aa15.57■□□□□ 0.08
PSMC1-205ENST00000555679 FBLN2P98095 1184 aa15.55■□□□□ 0.08
PSMC1-205ENST00000555679 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
PSMC1-205ENST00000555679 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.07
PSMC1-205ENST00000555679 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
PSMC1-205ENST00000555679 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
PSMC1-205ENST00000555679 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
PSMC1-205ENST00000555679 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
PSMC1-205ENST00000555679 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
PSMC1-205ENST00000555679 CC2D2AQ9P2K1 1620 aa15.33■□□□□ 0.04
PSMC1-205ENST00000555679 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
PSMC1-205ENST00000555679 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
PSMC1-205ENST00000555679 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
PSMC1-205ENST00000555679 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
PSMC1-205ENST00000555679 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
PSMC1-205ENST00000555679 SSUH2Q9Y2M2 353 aa15.28■□□□□ 0.04
PSMC1-205ENST00000555679 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
PSMC1-205ENST00000555679 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
PSMC1-205ENST00000555679 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
PSMC1-205ENST00000555679 FXR2P51116 673 aaKnown RBP eCLIP15.11■□□□□ 0.01
PSMC1-205ENST00000555679 SPDYE1Q8NFV5 336 aaPredicted RBP15.06■□□□□ 0
PSMC1-205ENST00000555679 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
PSMC1-205ENST00000555679 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
PSMC1-205ENST00000555679 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
PSMC1-205ENST00000555679 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
PSMC1-205ENST00000555679 PRR29P0C7W0 189 aa14.83□□□□□ -0.04
PSMC1-205ENST00000555679 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
PSMC1-205ENST00000555679 HAX1O00165 279 aa14.77□□□□□ -0.05
PSMC1-205ENST00000555679 EVX2Q03828 476 aa14.75□□□□□ -0.05
PSMC1-205ENST00000555679 CUX2O14529 1486 aa14.73□□□□□ -0.05
PSMC1-205ENST00000555679 SP7Q8TDD2 431 aaPredicted RBP14.7□□□□□ -0.06
PSMC1-205ENST00000555679 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
PSMC1-205ENST00000555679 PROM2Q8N271 834 aa14.65□□□□□ -0.06
PSMC1-205ENST00000555679 ERCC6Q03468 1493 aa14.64□□□□□ -0.07
PSMC1-205ENST00000555679 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
PSMC1-205ENST00000555679 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
PSMC1-205ENST00000555679 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
PSMC1-205ENST00000555679 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms