RNA–Protein interactions for RNA: ENST00000555253.1

PGF-205, Transcript of placental growth factor, humanhuman

TSL 2

Gene PGF, Length 3,549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-205ENST00000555253 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.69
PGF-205ENST00000555253 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
PGF-205ENST00000555253 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
PGF-205ENST00000555253 HRCP23327 699 aa23.13■■□□□ 1.29
PGF-205ENST00000555253 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
PGF-205ENST00000555253 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
PGF-205ENST00000555253 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
PGF-205ENST00000555253 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
PGF-205ENST00000555253 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
PGF-205ENST00000555253 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
PGF-205ENST00000555253 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
PGF-205ENST00000555253 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
PGF-205ENST00000555253 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
PGF-205ENST00000555253 TRIM26Q12899 539 aaPredicted RBP21.82■■□□□ 1.08
PGF-205ENST00000555253 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
PGF-205ENST00000555253 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
PGF-205ENST00000555253 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
PGF-205ENST00000555253 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
PGF-205ENST00000555253 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
PGF-205ENST00000555253 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
PGF-205ENST00000555253 MYT1Q01538 1121 aa21.51■■□□□ 1.03
PGF-205ENST00000555253 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
PGF-205ENST00000555253 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
PGF-205ENST00000555253 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
PGF-205ENST00000555253 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
PGF-205ENST00000555253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
PGF-205ENST00000555253 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1
PGF-205ENST00000555253 CCER1Q8TC90 406 aaPredicted RBP21.33■■□□□ 1
PGF-205ENST00000555253 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
PGF-205ENST00000555253 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
PGF-205ENST00000555253 ABCC9O60706 1549 aa20.93■□□□□ 0.94
PGF-205ENST00000555253 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
PGF-205ENST00000555253 MIER1Q8N108 512 aa20.66■□□□□ 0.9
PGF-205ENST00000555253 BCL11AQ9H165 835 aa20.62■□□□□ 0.89
PGF-205ENST00000555253 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
PGF-205ENST00000555253 BCANQ96GW7 911 aa20.53■□□□□ 0.88
PGF-205ENST00000555253 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
PGF-205ENST00000555253 ANP32EQ9BTT0 268 aa20.37■□□□□ 0.85
PGF-205ENST00000555253 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
PGF-205ENST00000555253 NACADO15069 1562 aa20.3■□□□□ 0.84
PGF-205ENST00000555253 RANGAP1P46060 587 aaPredicted RBP20.3■□□□□ 0.84
PGF-205ENST00000555253 SUPT16HQ9Y5B9 1047 aaKnown RBP20.29■□□□□ 0.84
PGF-205ENST00000555253 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
PGF-205ENST00000555253 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
PGF-205ENST00000555253 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
PGF-205ENST00000555253 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
PGF-205ENST00000555253 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
PGF-205ENST00000555253 ITGAEP38570 1179 aa20.08■□□□□ 0.8
PGF-205ENST00000555253 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.8
PGF-205ENST00000555253 FKBP8Q14318 412 aa20.04■□□□□ 0.8
PGF-205ENST00000555253 ERICH6Q7L0X2 663 aa20.03■□□□□ 0.8
PGF-205ENST00000555253 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
PGF-205ENST00000555253 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
PGF-205ENST00000555253 APLP2Q06481 763 aa19.91■□□□□ 0.78
PGF-205ENST00000555253 NEFLP07196 543 aa19.9■□□□□ 0.78
PGF-205ENST00000555253 WIZO95785 1651 aa19.86■□□□□ 0.77
PGF-205ENST00000555253 RBM19Q9Y4C8 960 aaKnown RBP19.83■□□□□ 0.77
PGF-205ENST00000555253 PRKCSHP14314 528 aaPredicted RBP19.81■□□□□ 0.76
PGF-205ENST00000555253 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
PGF-205ENST00000555253 IRX6P78412 446 aaPredicted RBP19.76■□□□□ 0.75
PGF-205ENST00000555253 UNC13AQ9UPW8 1703 aa19.75■□□□□ 0.75
PGF-205ENST00000555253 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
PGF-205ENST00000555253 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
PGF-205ENST00000555253 HIRIP3Q9BW71 556 aaPredicted RBP19.69■□□□□ 0.74
PGF-205ENST00000555253 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
PGF-205ENST00000555253 DDX10Q13206 875 aaKnown RBP19.66■□□□□ 0.74
PGF-205ENST00000555253 NBR1Q14596 966 aa19.63■□□□□ 0.73
PGF-205ENST00000555253 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
PGF-205ENST00000555253 MSH5O43196 834 aa19.58■□□□□ 0.73
PGF-205ENST00000555253 SMARCA4P51532 1647 aa19.58■□□□□ 0.73
PGF-205ENST00000555253 ANO8Q9HCE9 1232 aaPredicted RBP19.51■□□□□ 0.71
PGF-205ENST00000555253 RTN4Q9NQC3 1192 aaKnown RBP19.51■□□□□ 0.71
PGF-205ENST00000555253 DEKP35659 375 aaKnown RBP19.5■□□□□ 0.71
PGF-205ENST00000555253 SOGA1O94964 1423 aa19.49■□□□□ 0.71
PGF-205ENST00000555253 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
PGF-205ENST00000555253 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
PGF-205ENST00000555253 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
PGF-205ENST00000555253 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
PGF-205ENST00000555253 CNGB1Q14028 1251 aaPredicted RBP19.41■□□□□ 0.7
PGF-205ENST00000555253 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
PGF-205ENST00000555253 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
PGF-205ENST00000555253 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
PGF-205ENST00000555253 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.35■□□□□ 0.69
PGF-205ENST00000555253 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
PGF-205ENST00000555253 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
PGF-205ENST00000555253 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.68
PGF-205ENST00000555253 ANP32CO43423 234 aa19.32■□□□□ 0.68
PGF-205ENST00000555253 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
PGF-205ENST00000555253 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
PGF-205ENST00000555253 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
PGF-205ENST00000555253 DHX57Q6P158 1386 aaKnown RBP19.25■□□□□ 0.67
PGF-205ENST00000555253 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
PGF-205ENST00000555253 RTL5Q5HYW3 569 aaPredicted RBP19.24■□□□□ 0.67
PGF-205ENST00000555253 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
PGF-205ENST00000555253 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
PGF-205ENST00000555253 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
PGF-205ENST00000555253 CLIP1P30622 1438 aa19.22■□□□□ 0.67
PGF-205ENST00000555253 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
PGF-205ENST00000555253 EIF5BO60841 1220 aaKnown RBP19.18■□□□□ 0.66
PGF-205ENST00000555253 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms