RNA–Protein interactions for RNA: ENST00000554293.1

SEL1L-202, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 5

Gene SEL1L, Length 767 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-202ENST00000554293 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
SEL1L-202ENST00000554293 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
SEL1L-202ENST00000554293 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
SEL1L-202ENST00000554293 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
SEL1L-202ENST00000554293 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
SEL1L-202ENST00000554293 FOXD1Q16676 465 aa18.85■□□□□ 0.61
SEL1L-202ENST00000554293 ADRA2BP18089 450 aa18.25■□□□□ 0.51
SEL1L-202ENST00000554293 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
SEL1L-202ENST00000554293 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
SEL1L-202ENST00000554293 MSH5O43196 834 aa17.38■□□□□ 0.37
SEL1L-202ENST00000554293 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
SEL1L-202ENST00000554293 KCNA4P22459 653 aa16.8■□□□□ 0.28
SEL1L-202ENST00000554293 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
SEL1L-202ENST00000554293 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
SEL1L-202ENST00000554293 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
SEL1L-202ENST00000554293 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
SEL1L-202ENST00000554293 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
SEL1L-202ENST00000554293 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
SEL1L-202ENST00000554293 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
SEL1L-202ENST00000554293 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
SEL1L-202ENST00000554293 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
SEL1L-202ENST00000554293 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
SEL1L-202ENST00000554293 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
SEL1L-202ENST00000554293 DCAF8L1A6NGE4 600 aa15.56■□□□□ 0.08
SEL1L-202ENST00000554293 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
SEL1L-202ENST00000554293 ZBTB22O15209 634 aa15.46■□□□□ 0.07
SEL1L-202ENST00000554293 POTEDQ86YR6 584 aa15.45■□□□□ 0.06
SEL1L-202ENST00000554293 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
SEL1L-202ENST00000554293 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
SEL1L-202ENST00000554293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
SEL1L-202ENST00000554293 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
SEL1L-202ENST00000554293 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
SEL1L-202ENST00000554293 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
SEL1L-202ENST00000554293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
SEL1L-202ENST00000554293 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
SEL1L-202ENST00000554293 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
SEL1L-202ENST00000554293 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
SEL1L-202ENST00000554293 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
SEL1L-202ENST00000554293 APLP2Q06481 763 aa14.78□□□□□ -0.04
SEL1L-202ENST00000554293 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
SEL1L-202ENST00000554293 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
SEL1L-202ENST00000554293 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
SEL1L-202ENST00000554293 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
SEL1L-202ENST00000554293 CAPN15O75808 1086 aa14.5□□□□□ -0.09
SEL1L-202ENST00000554293 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
SEL1L-202ENST00000554293 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
SEL1L-202ENST00000554293 POLA2Q14181 598 aa14.26□□□□□ -0.13
SEL1L-202ENST00000554293 ABCB7O75027 752 aa14.22□□□□□ -0.13
SEL1L-202ENST00000554293 DSG3P32926 999 aa14.21□□□□□ -0.13
SEL1L-202ENST00000554293 FBLN2P98095 1184 aa14.11□□□□□ -0.15
SEL1L-202ENST00000554293 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
SEL1L-202ENST00000554293 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
SEL1L-202ENST00000554293 FKBP8Q14318 412 aa14.04□□□□□ -0.16
SEL1L-202ENST00000554293 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
SEL1L-202ENST00000554293 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
SEL1L-202ENST00000554293 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
SEL1L-202ENST00000554293 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
SEL1L-202ENST00000554293 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
SEL1L-202ENST00000554293 PROM2Q8N271 834 aa13.67□□□□□ -0.22
SEL1L-202ENST00000554293 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
SEL1L-202ENST00000554293 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
SEL1L-202ENST00000554293 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
SEL1L-202ENST00000554293 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
SEL1L-202ENST00000554293 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.25
SEL1L-202ENST00000554293 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEL1L-202ENST00000554293 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
SEL1L-202ENST00000554293 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
SEL1L-202ENST00000554293 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
SEL1L-202ENST00000554293 ABCC9O60706 1549 aa13.28□□□□□ -0.28
SEL1L-202ENST00000554293 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
SEL1L-202ENST00000554293 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
SEL1L-202ENST00000554293 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
SEL1L-202ENST00000554293 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
SEL1L-202ENST00000554293 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
SEL1L-202ENST00000554293 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
SEL1L-202ENST00000554293 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
SEL1L-202ENST00000554293 MIER1Q8N108 512 aa13.1□□□□□ -0.31
SEL1L-202ENST00000554293 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
SEL1L-202ENST00000554293 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
SEL1L-202ENST00000554293 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
SEL1L-202ENST00000554293 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
SEL1L-202ENST00000554293 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
SEL1L-202ENST00000554293 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
SEL1L-202ENST00000554293 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
SEL1L-202ENST00000554293 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
SEL1L-202ENST00000554293 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEL1L-202ENST00000554293 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
SEL1L-202ENST00000554293 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
SEL1L-202ENST00000554293 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
SEL1L-202ENST00000554293 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEL1L-202ENST00000554293 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
SEL1L-202ENST00000554293 NUBP1P53384 320 aa12.76□□□□□ -0.37
SEL1L-202ENST00000554293 PKD2Q13563 968 aa12.75□□□□□ -0.37
SEL1L-202ENST00000554293 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
SEL1L-202ENST00000554293 FARP1Q9Y4F1 1045 aaPredicted RBP12.73□□□□□ -0.37
SEL1L-202ENST00000554293 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
SEL1L-202ENST00000554293 GSE1Q14687 1217 aa12.7□□□□□ -0.38
SEL1L-202ENST00000554293 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
SEL1L-202ENST00000554293 NACADO15069 1562 aa12.67□□□□□ -0.38
SEL1L-202ENST00000554293 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms