RNA–Protein interactions for RNA: ENST00000552128.2

TSPAN8-206, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 759 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-206ENST00000552128 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
TSPAN8-206ENST00000552128 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
TSPAN8-206ENST00000552128 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
TSPAN8-206ENST00000552128 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
TSPAN8-206ENST00000552128 FOXD1Q16676 465 aa18.12■□□□□ 0.49
TSPAN8-206ENST00000552128 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
TSPAN8-206ENST00000552128 MSH5O43196 834 aa17.28■□□□□ 0.36
TSPAN8-206ENST00000552128 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
TSPAN8-206ENST00000552128 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
TSPAN8-206ENST00000552128 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
TSPAN8-206ENST00000552128 ADRA2BP18089 450 aa16.4■□□□□ 0.22
TSPAN8-206ENST00000552128 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
TSPAN8-206ENST00000552128 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.04
TSPAN8-206ENST00000552128 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
TSPAN8-206ENST00000552128 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
TSPAN8-206ENST00000552128 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
TSPAN8-206ENST00000552128 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
TSPAN8-206ENST00000552128 RNF39Q9H2S5 420 aa14.64□□□□□ -0.07
TSPAN8-206ENST00000552128 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
TSPAN8-206ENST00000552128 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
TSPAN8-206ENST00000552128 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
TSPAN8-206ENST00000552128 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
TSPAN8-206ENST00000552128 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
TSPAN8-206ENST00000552128 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
TSPAN8-206ENST00000552128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.19
TSPAN8-206ENST00000552128 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
TSPAN8-206ENST00000552128 POTEHQ6S545 545 aa13.77□□□□□ -0.21
TSPAN8-206ENST00000552128 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
TSPAN8-206ENST00000552128 DSG3P32926 999 aa13.51□□□□□ -0.25
TSPAN8-206ENST00000552128 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
TSPAN8-206ENST00000552128 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
TSPAN8-206ENST00000552128 CAPN15O75808 1086 aa13.45□□□□□ -0.26
TSPAN8-206ENST00000552128 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
TSPAN8-206ENST00000552128 KCNA4P22459 653 aa13.39□□□□□ -0.27
TSPAN8-206ENST00000552128 APLP2Q06481 763 aa13.22□□□□□ -0.29
TSPAN8-206ENST00000552128 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
TSPAN8-206ENST00000552128 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
TSPAN8-206ENST00000552128 ABCC9O60706 1549 aa13.09□□□□□ -0.31
TSPAN8-206ENST00000552128 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
TSPAN8-206ENST00000552128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
TSPAN8-206ENST00000552128 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
TSPAN8-206ENST00000552128 ABCB7O75027 752 aa13.03□□□□□ -0.32
TSPAN8-206ENST00000552128 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
TSPAN8-206ENST00000552128 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
TSPAN8-206ENST00000552128 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
TSPAN8-206ENST00000552128 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
TSPAN8-206ENST00000552128 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
TSPAN8-206ENST00000552128 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
TSPAN8-206ENST00000552128 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
TSPAN8-206ENST00000552128 SHROOM4Q9ULL8 1493 aa12.74□□□□□ -0.37
TSPAN8-206ENST00000552128 NACADO15069 1562 aa12.7□□□□□ -0.38
TSPAN8-206ENST00000552128 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
TSPAN8-206ENST00000552128 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
TSPAN8-206ENST00000552128 RB1CC1Q8TDY2 1594 aa12.66□□□□□ -0.38
TSPAN8-206ENST00000552128 MYO15BQ96JP2 1530 aa12.66□□□□□ -0.38
TSPAN8-206ENST00000552128 POLA2Q14181 598 aa12.63□□□□□ -0.39
TSPAN8-206ENST00000552128 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
TSPAN8-206ENST00000552128 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
TSPAN8-206ENST00000552128 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
TSPAN8-206ENST00000552128 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
TSPAN8-206ENST00000552128 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
TSPAN8-206ENST00000552128 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
TSPAN8-206ENST00000552128 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
TSPAN8-206ENST00000552128 HAX1O00165 279 aa12.35□□□□□ -0.43
TSPAN8-206ENST00000552128 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
TSPAN8-206ENST00000552128 ZBTB22O15209 634 aa12.34□□□□□ -0.43
TSPAN8-206ENST00000552128 UNC13AQ9UPW8 1703 aa12.28□□□□□ -0.44
TSPAN8-206ENST00000552128 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
TSPAN8-206ENST00000552128 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
TSPAN8-206ENST00000552128 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
TSPAN8-206ENST00000552128 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
TSPAN8-206ENST00000552128 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
TSPAN8-206ENST00000552128 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
TSPAN8-206ENST00000552128 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
TSPAN8-206ENST00000552128 CECR2Q9BXF3 1484 aa12.09□□□□□ -0.47
TSPAN8-206ENST00000552128 EVX2Q03828 476 aa12.05□□□□□ -0.48
TSPAN8-206ENST00000552128 BAZ1AQ9NRL2 1556 aaPredicted RBP12.02□□□□□ -0.49
TSPAN8-206ENST00000552128 RSF1Q96T23 1441 aaPredicted RBP12□□□□□ -0.49
TSPAN8-206ENST00000552128 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
TSPAN8-206ENST00000552128 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
TSPAN8-206ENST00000552128 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
TSPAN8-206ENST00000552128 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
TSPAN8-206ENST00000552128 SMARCA4P51532 1647 aa11.96□□□□□ -0.5
TSPAN8-206ENST00000552128 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
TSPAN8-206ENST00000552128 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
TSPAN8-206ENST00000552128 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
TSPAN8-206ENST00000552128 EIF4G1Q04637 1599 aaKnown RBP11.9□□□□□ -0.5
TSPAN8-206ENST00000552128 WIZO95785 1651 aa11.9□□□□□ -0.5
TSPAN8-206ENST00000552128 FBLN2P98095 1184 aa11.88□□□□□ -0.51
TSPAN8-206ENST00000552128 LHX8Q68G74 356 aa11.87□□□□□ -0.51
TSPAN8-206ENST00000552128 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
TSPAN8-206ENST00000552128 GABBR2O75899 941 aa11.84□□□□□ -0.51
TSPAN8-206ENST00000552128 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
TSPAN8-206ENST00000552128 ATAD2BQ9ULI0 1458 aa11.82□□□□□ -0.52
TSPAN8-206ENST00000552128 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
TSPAN8-206ENST00000552128 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
TSPAN8-206ENST00000552128 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.52
TSPAN8-206ENST00000552128 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.53
TSPAN8-206ENST00000552128 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
TSPAN8-206ENST00000552128 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms