RNA–Protein interactions for RNA: ENST00000551174.1

LINC02401-202, Transcript of long intergenic non-protein coding RNA 2401, humanhuman

TSL 5

Gene LINC02401, Length 713 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02401-202ENST00000551174 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
LINC02401-202ENST00000551174 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
LINC02401-202ENST00000551174 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
LINC02401-202ENST00000551174 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
LINC02401-202ENST00000551174 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
LINC02401-202ENST00000551174 FOXD1Q16676 465 aa20.42■□□□□ 0.86
LINC02401-202ENST00000551174 MSH5O43196 834 aa19.67■□□□□ 0.74
LINC02401-202ENST00000551174 PIAS4Q8N2W9 510 aaPredicted RBP18.75■□□□□ 0.59
LINC02401-202ENST00000551174 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
LINC02401-202ENST00000551174 ADRA2BP18089 450 aa17.87■□□□□ 0.45
LINC02401-202ENST00000551174 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
LINC02401-202ENST00000551174 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
LINC02401-202ENST00000551174 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
LINC02401-202ENST00000551174 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
LINC02401-202ENST00000551174 POTEHQ6S545 545 aa16.69■□□□□ 0.26
LINC02401-202ENST00000551174 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
LINC02401-202ENST00000551174 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
LINC02401-202ENST00000551174 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
LINC02401-202ENST00000551174 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
LINC02401-202ENST00000551174 NISCHQ9Y2I1 1504 aa15.82■□□□□ 0.12
LINC02401-202ENST00000551174 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
LINC02401-202ENST00000551174 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
LINC02401-202ENST00000551174 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
LINC02401-202ENST00000551174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC02401-202ENST00000551174 DSG3P32926 999 aa15.11■□□□□ 0.01
LINC02401-202ENST00000551174 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
LINC02401-202ENST00000551174 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
LINC02401-202ENST00000551174 SP7Q8TDD2 431 aaPredicted RBP14.97□□□□□ -0.01
LINC02401-202ENST00000551174 CAPN15O75808 1086 aa14.92□□□□□ -0.02
LINC02401-202ENST00000551174 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
LINC02401-202ENST00000551174 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
LINC02401-202ENST00000551174 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
LINC02401-202ENST00000551174 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
LINC02401-202ENST00000551174 PLSCR2Q9NRY7 297 aa14.44□□□□□ -0.1
LINC02401-202ENST00000551174 ABCB7O75027 752 aa14.42□□□□□ -0.1
LINC02401-202ENST00000551174 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
LINC02401-202ENST00000551174 HAX1O00165 279 aa14.27□□□□□ -0.13
LINC02401-202ENST00000551174 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
LINC02401-202ENST00000551174 APLP2Q06481 763 aa14.07□□□□□ -0.16
LINC02401-202ENST00000551174 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
LINC02401-202ENST00000551174 LHX8Q68G74 356 aa14.06□□□□□ -0.16
LINC02401-202ENST00000551174 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
LINC02401-202ENST00000551174 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
LINC02401-202ENST00000551174 EVX2Q03828 476 aa13.92□□□□□ -0.18
LINC02401-202ENST00000551174 ABCC9O60706 1549 aa13.9□□□□□ -0.18
LINC02401-202ENST00000551174 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
LINC02401-202ENST00000551174 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
LINC02401-202ENST00000551174 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC02401-202ENST00000551174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
LINC02401-202ENST00000551174 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
LINC02401-202ENST00000551174 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
LINC02401-202ENST00000551174 POLA2Q14181 598 aa13.61□□□□□ -0.23
LINC02401-202ENST00000551174 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
LINC02401-202ENST00000551174 GABBR2O75899 941 aa13.54□□□□□ -0.24
LINC02401-202ENST00000551174 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
LINC02401-202ENST00000551174 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
LINC02401-202ENST00000551174 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
LINC02401-202ENST00000551174 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
LINC02401-202ENST00000551174 POTEMA6NI47 508 aa13.31□□□□□ -0.28
LINC02401-202ENST00000551174 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
LINC02401-202ENST00000551174 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
LINC02401-202ENST00000551174 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
LINC02401-202ENST00000551174 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
LINC02401-202ENST00000551174 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
LINC02401-202ENST00000551174 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
LINC02401-202ENST00000551174 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
LINC02401-202ENST00000551174 ZCCHC6Q5VYS8 1495 aaKnown RBP13.15□□□□□ -0.3
LINC02401-202ENST00000551174 NACADO15069 1562 aa13.13□□□□□ -0.31
LINC02401-202ENST00000551174 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC02401-202ENST00000551174 OTUD5Q96G74 571 aa13□□□□□ -0.33
LINC02401-202ENST00000551174 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.33
LINC02401-202ENST00000551174 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
LINC02401-202ENST00000551174 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
LINC02401-202ENST00000551174 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
LINC02401-202ENST00000551174 DCBLD2Q96PD2 775 aa12.92□□□□□ -0.34
LINC02401-202ENST00000551174 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
LINC02401-202ENST00000551174 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
LINC02401-202ENST00000551174 CLCN6P51797 869 aa12.83□□□□□ -0.36
LINC02401-202ENST00000551174 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
LINC02401-202ENST00000551174 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
LINC02401-202ENST00000551174 KCNA4P22459 653 aa12.8□□□□□ -0.36
LINC02401-202ENST00000551174 SPDYE1Q8NFV5 336 aaPredicted RBP12.8□□□□□ -0.36
LINC02401-202ENST00000551174 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
LINC02401-202ENST00000551174 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
LINC02401-202ENST00000551174 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
LINC02401-202ENST00000551174 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
LINC02401-202ENST00000551174 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
LINC02401-202ENST00000551174 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
LINC02401-202ENST00000551174 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
LINC02401-202ENST00000551174 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
LINC02401-202ENST00000551174 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
LINC02401-202ENST00000551174 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
LINC02401-202ENST00000551174 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
LINC02401-202ENST00000551174 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
LINC02401-202ENST00000551174 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.42
LINC02401-202ENST00000551174 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
LINC02401-202ENST00000551174 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
LINC02401-202ENST00000551174 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
LINC02401-202ENST00000551174 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
LINC02401-202ENST00000551174 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms