RNA–Protein interactions for RNA: ENST00000549233.2

PMEL-208, Transcript of premelanosome protein, humanhuman

TSL 5

Gene PMEL, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-208ENST00000549233 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
PMEL-208ENST00000549233 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
PMEL-208ENST00000549233 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
PMEL-208ENST00000549233 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
PMEL-208ENST00000549233 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
PMEL-208ENST00000549233 FOXD1Q16676 465 aa15.92■□□□□ 0.14
PMEL-208ENST00000549233 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
PMEL-208ENST00000549233 ADRA2BP18089 450 aa15.25■□□□□ 0.03
PMEL-208ENST00000549233 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
PMEL-208ENST00000549233 MSH5O43196 834 aa14.69□□□□□ -0.06
PMEL-208ENST00000549233 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
PMEL-208ENST00000549233 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
PMEL-208ENST00000549233 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
PMEL-208ENST00000549233 KCNA4P22459 653 aa13.78□□□□□ -0.2
PMEL-208ENST00000549233 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
PMEL-208ENST00000549233 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
PMEL-208ENST00000549233 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
PMEL-208ENST00000549233 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
PMEL-208ENST00000549233 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
PMEL-208ENST00000549233 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
PMEL-208ENST00000549233 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
PMEL-208ENST00000549233 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
PMEL-208ENST00000549233 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
PMEL-208ENST00000549233 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
PMEL-208ENST00000549233 SLC4A2P04920 1241 aa12.83□□□□□ -0.36
PMEL-208ENST00000549233 ZBTB22O15209 634 aa12.73□□□□□ -0.37
PMEL-208ENST00000549233 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
PMEL-208ENST00000549233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
PMEL-208ENST00000549233 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
PMEL-208ENST00000549233 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
PMEL-208ENST00000549233 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
PMEL-208ENST00000549233 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
PMEL-208ENST00000549233 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
PMEL-208ENST00000549233 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
PMEL-208ENST00000549233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
PMEL-208ENST00000549233 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
PMEL-208ENST00000549233 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
PMEL-208ENST00000549233 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
PMEL-208ENST00000549233 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
PMEL-208ENST00000549233 APLP2Q06481 763 aa12.25□□□□□ -0.45
PMEL-208ENST00000549233 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
PMEL-208ENST00000549233 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
PMEL-208ENST00000549233 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
PMEL-208ENST00000549233 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
PMEL-208ENST00000549233 ABCC9O60706 1549 aa12.08□□□□□ -0.48
PMEL-208ENST00000549233 CAPN15O75808 1086 aa12.07□□□□□ -0.48
PMEL-208ENST00000549233 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
PMEL-208ENST00000549233 DSG3P32926 999 aa11.98□□□□□ -0.49
PMEL-208ENST00000549233 POLA2Q14181 598 aa11.86□□□□□ -0.51
PMEL-208ENST00000549233 ABCB7O75027 752 aa11.84□□□□□ -0.51
PMEL-208ENST00000549233 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
PMEL-208ENST00000549233 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
PMEL-208ENST00000549233 FBLN2P98095 1184 aa11.61□□□□□ -0.55
PMEL-208ENST00000549233 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
PMEL-208ENST00000549233 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
PMEL-208ENST00000549233 CCDC180Q9P1Z9 1646 aa11.44□□□□□ -0.58
PMEL-208ENST00000549233 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
PMEL-208ENST00000549233 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
PMEL-208ENST00000549233 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
PMEL-208ENST00000549233 RBM42Q9BTD8 480 aaKnown RBP11.4□□□□□ -0.58
PMEL-208ENST00000549233 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
PMEL-208ENST00000549233 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
PMEL-208ENST00000549233 FKBP8Q14318 412 aa11.33□□□□□ -0.6
PMEL-208ENST00000549233 PROM2Q8N271 834 aa11.33□□□□□ -0.6
PMEL-208ENST00000549233 ZNF692Q9BU19 519 aaPredicted RBP11.29□□□□□ -0.6
PMEL-208ENST00000549233 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
PMEL-208ENST00000549233 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
PMEL-208ENST00000549233 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
PMEL-208ENST00000549233 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
PMEL-208ENST00000549233 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
PMEL-208ENST00000549233 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
PMEL-208ENST00000549233 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
PMEL-208ENST00000549233 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
PMEL-208ENST00000549233 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
PMEL-208ENST00000549233 BICRAQ9NZM4 1560 aa10.95□□□□□ -0.66
PMEL-208ENST00000549233 CC2D2AQ9P2K1 1620 aa10.94□□□□□ -0.66
PMEL-208ENST00000549233 CECR2Q9BXF3 1484 aa10.92□□□□□ -0.66
PMEL-208ENST00000549233 CHRDL2Q6WN34 429 aa10.91□□□□□ -0.66
PMEL-208ENST00000549233 CLEC11AQ9Y240 323 aa10.89□□□□□ -0.67
PMEL-208ENST00000549233 NACADO15069 1562 aa10.87□□□□□ -0.67
PMEL-208ENST00000549233 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
PMEL-208ENST00000549233 PRR29P0C7W0 189 aa10.85□□□□□ -0.67
PMEL-208ENST00000549233 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
PMEL-208ENST00000549233 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
PMEL-208ENST00000549233 CREBZFQ9NS37 354 aa10.79□□□□□ -0.68
PMEL-208ENST00000549233 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
PMEL-208ENST00000549233 IFNLR1Q8IU57 520 aaPredicted RBP10.71□□□□□ -0.69
PMEL-208ENST00000549233 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
PMEL-208ENST00000549233 MIER1Q8N108 512 aa10.7□□□□□ -0.7
PMEL-208ENST00000549233 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
PMEL-208ENST00000549233 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
PMEL-208ENST00000549233 TRIM41Q8WV44 630 aa10.68□□□□□ -0.7
PMEL-208ENST00000549233 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
PMEL-208ENST00000549233 CUX2O14529 1486 aa10.67□□□□□ -0.7
PMEL-208ENST00000549233 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
PMEL-208ENST00000549233 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
PMEL-208ENST00000549233 FARP1Q9Y4F1 1045 aaPredicted RBP10.63□□□□□ -0.71
PMEL-208ENST00000549233 POTEHQ6S545 545 aa10.57□□□□□ -0.72
PMEL-208ENST00000549233 SHROOM4Q9ULL8 1493 aa10.56□□□□□ -0.72
PMEL-208ENST00000549233 NPM1P06748 294 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms